RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SMAD4Q13485 552 aaKnown RBP21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 ERN2Q76MJ5 926 aaKnown RBP21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 TRPM8Q7Z2W7 1104 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 TXNDC5Q8NBS9 432 aaKnown RBP21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 KIAA1191Q96A73 305 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 SORT1Q99523 831 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 SLC30A3Q99726 388 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 SIKE1Q9BRV8 207 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 ZSCAN5AQ9BUG6 496 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 HDAC8Q9BY41 377 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 DRC3Q9H069 523 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 COLQQ9Y215 455 aaPredicted RBP21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 DNAJC16Q9Y2G8 782 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 PRSS21Q9Y6M0 314 aa21.26■□□□□ 0.99
TSPAN3-202ENST00000346495 COL4A2P08572 1712 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 IGLV3-16A0A075B6K0 115 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 ANTXRLA6NF34 631 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 IQCF5A8MTL0 148 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 SPECC1L-ADORA2AF8WAN1 911 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 K7EQS6 105 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 AREL1O15033 823 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 SMIM24O75264 130 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 CTHP32929 405 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 PSMD8P48556 350 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 LIG3P49916 1009 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 ARFIP2P53365 341 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 NAGLUP54802 743 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 RCN2Q14257 317 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 ACOX1Q15067 660 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 ZNF284Q2VY69 593 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 HENMT1Q5T8I9 393 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 CCDC121Q6ZUS5 278 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 WDR75Q8IWA0 830 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 GIMAP7Q8NHV1 300 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 STAG3L4Q8TBR4 150 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 PIWIL2Q8TC59 973 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 INPP5DQ92835 1189 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 RAB7BQ96AH8 199 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 CCDC97Q96F63 343 aaPredicted RBP21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 RMDN2Q96LZ7 410 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 SARS2Q9NP81 518 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 ITM2BQ9Y287 266 aa21.25■□□□□ 0.99
TSPAN3-202ENST00000346495 A0A0G2JND7 137 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 A8MT66 165 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 WNT9AO14904 365 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 SPINT1O43278 529 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 NPHS1O60500 1241 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 IPO13O94829 963 aaKnown RBP21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 SERPINB5P36952 375 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 KIR2DL1P43626 348 aaPredicted RBP21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 CAMK2GQ13555 558 aaPredicted RBP21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 CPNE9Q8IYJ1 553 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 PLCD3Q8N3E9 789 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 CLDN19Q8N6F1 224 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 CCT6BQ92526 530 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 SCAMP4Q969E2 229 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 LINGO1Q96FE5 620 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 FAM161BQ96MY7 647 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 WRAP53Q9BUR4 548 aaKnown RBP21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 KDM4CQ9H3R0 1056 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 KCNK13Q9HB14 408 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 KCNK4Q9NYG8 393 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 NCKIPSDQ9NZQ3 722 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 CKAP5Q14008 2032 aa21.24■□□□□ 0.99
TSPAN3-202ENST00000346495 MBTPS2O43462 519 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 RNASEH1O60930 286 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 DCTN3O75935 186 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 SNUPNO95149 360 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 SLC25A14O95258 325 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 TPBGLP0DKB5 382 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 KITP10721 976 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 KCNA5P22460 613 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 ARRB2P32121 409 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 WASP42768 502 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 NFKB2Q00653 900 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 OR4D1Q15615 310 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 TMEM52BQ4KMG9 183 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 GPRC6AQ5T6X5 926 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 PIWIL4Q7Z3Z4 852 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 CYP2U1Q7Z449 544 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 RALGPS2Q86X27 583 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 PDLIM5Q96HC4 596 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 COQ10AQ96MF6 247 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 PANX3Q96QZ0 392 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 ATOH8Q96SQ7 321 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 RIOK2Q9BVS4 552 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 TMEM120AQ9BXJ8 343 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 RSPH9Q9H1X1 276 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 ABCG8Q9H221 673 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 C8orf33Q9H7E9 229 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 MARCOQ9UEW3 520 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 TMPRSS11EQ9UL52 423 aa21.23■□□□□ 0.99
TSPAN3-202ENST00000346495 NEMP2A6NFY4 417 aa21.22■□□□□ 0.99
TSPAN3-202ENST00000346495 SYNCRIPO60506 623 aaKnown RBP21.22■□□□□ 0.99
TSPAN3-202ENST00000346495 KERAO60938 352 aa21.22■□□□□ 0.99
TSPAN3-202ENST00000346495 TRIM16O95361 564 aa21.22■□□□□ 0.99
TSPAN3-202ENST00000346495 TSPAN12O95859 305 aa21.22■□□□□ 0.99
TSPAN3-202ENST00000346495 TIE1P35590 1138 aa21.22■□□□□ 0.99
TSPAN3-202ENST00000346495 KCNC1P48547 511 aa21.22■□□□□ 0.99
TSPAN3-202ENST00000346495 SEC13P55735 322 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms