RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 OR2T11Q8NH01 316 aa15.31■□□□□ 0.04
UPF3B-202ENST00000345865 CNBD2Q96M20 576 aa15.31■□□□□ 0.04
UPF3B-202ENST00000345865 COQ10BQ9H8M1 238 aa15.31■□□□□ 0.04
UPF3B-202ENST00000345865 ABCD2Q9UBJ2 740 aa15.31■□□□□ 0.04
UPF3B-202ENST00000345865 EIF2B4Q9UI10 523 aaKnown RBP15.31■□□□□ 0.04
UPF3B-202ENST00000345865 STOML2Q9UJZ1 356 aa15.31■□□□□ 0.04
UPF3B-202ENST00000345865 MYOCOSA0A1B0GUC4 107 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 ASPDHA6ND91 283 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 BBIP1A8MTZ0 92 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 E2F3O00716 465 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 ESRRBO95718 433 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 CLCN4P51793 760 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 CLCN7P51798 805 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 IL2P60568 153 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
UPF3B-202ENST00000345865 MYBPC1Q00872 1141 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 C18orf21Q32NC0 220 aaPredicted RBP15.3■□□□□ 0.04
UPF3B-202ENST00000345865 XKR7Q5GH72 579 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 BLOC1S3Q6QNY0 202 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 TAS2R42Q7RTR8 314 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 LYSMD3Q7Z3D4 306 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 TMCO2Q7Z6W1 182 aaPredicted RBP15.3■□□□□ 0.04
UPF3B-202ENST00000345865 KCNJ9Q92806 393 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 ALG14Q96F25 216 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 DUS3LQ96G46 650 aaKnown RBP15.3■□□□□ 0.04
UPF3B-202ENST00000345865 CDK15Q96Q40 435 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 HGH1Q9BTY7 390 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 P2RY12Q9H244 342 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 CMTM6Q9NX76 183 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 VPS51Q9UID3 782 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 TSR3Q9UJK0 312 aaKnown RBP15.3■□□□□ 0.04
UPF3B-202ENST00000345865 NDUFAF1Q9Y375 327 aa15.3■□□□□ 0.04
UPF3B-202ENST00000345865 ZNF839A8K0R7 811 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 PGM3O95394 542 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CXCL10P02778 98 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 MBL2P11226 248 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CD9P21926 228 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SLC7A1P30825 629 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 GRIA3P42263 894 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 TAF12Q16514 161 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 MTX3Q5HYI7 312 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 NAIF1Q69YI7 327 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 DNAJB7Q7Z6W7 309 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 DHFR2Q86XF0 187 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 GPSM1Q86YR5 675 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 OR52B6Q8NGF0 335 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CANT1Q8WVQ1 401 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 VPS33AQ96AX1 596 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 EME1Q96AY2 570 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SLC29A1Q99808 456 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 TM6SF2Q9BZW4 377 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SNX13Q9Y5W8 968 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CRCPO75575 148 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SLC6A2P23975 617 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CSKP41240 450 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 ATN1P54259 1190 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 RHOAP61586 193 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 TGFBIQ15582 683 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 INO80DQ53TQ3 878 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 OGFOD2Q6N063 350 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SATL1Q86VE3 508 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CAMK1DQ8IU85 385 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 MINDY1Q8N5J2 469 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 AUTS2Q8WXX7 1259 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 UHRF1Q96T88 793 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 SPATA16Q9BXB7 569 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CFHR5Q9BXR6 569 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 ZNF334Q9HCZ1 680 aaPredicted RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 DNMT3BQ9UBC3 853 aaKnown RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 EGFL7Q9UHF1 273 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 CNOT6Q9ULM6 557 aaKnown RBP15.29■□□□□ 0.04
UPF3B-202ENST00000345865 VPS9D1Q9Y2B5 631 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 ZNF711Q9Y462 761 aa15.29■□□□□ 0.04
UPF3B-202ENST00000345865 GFRA2O00451 464 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 GAPDHSO14556 408 aaPredicted RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 ANGPT2O15123 496 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 SMAD6O43541 496 aaKnown RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 OR4F21O95013 312 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 CYBBP04839 570 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 IDO1P14902 403 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 PTGER3P43115 390 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 ADARP55265 1226 aaKnown RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 RBBP7Q16576 425 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 CNPY1Q3B7I2 92 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 TTC16Q8NEE8 873 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 PIH1D2Q8WWB5 315 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 LRRC58Q96CX6 371 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 HOPXQ9BPY8 73 aaPredicted RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 SLC2A11Q9BYW1 496 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 HIPK3Q9H422 1215 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 NOL11Q9H8H0 719 aaKnown RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 PAPOLBQ9NRJ5 636 aaKnown RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 AIG1Q9NVV5 245 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 CD274Q9NZQ7 290 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 APPL1Q9UKG1 709 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 CNOT11Q9UKZ1 510 aaKnown RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 E5RI56 91 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms