RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 UGT1A9O60656 530 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 AVILO75366 819 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 CDK14O94921 469 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 TTC4O95801 387 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 CEACAM5P06731 702 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 POLBP06746 335 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A6P19224 532 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 MSH3P20585 1137 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A1P22309 533 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A4P22310 534 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 EPHA8P29322 1005 aaPredicted RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 AKT1P31749 480 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A3P35503 534 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A5P35504 534 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 RPL21P46778 160 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 CRADDP78560 199 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 ILF3Q12906 894 aaKnown RBP eCLIP11.72□□□□□ -0.53
SNCA-202ENST00000345009 LRP8Q14114 963 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 PTPRCAPQ14761 206 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 ALG11Q2TAA5 492 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 FASTKD1Q53R41 847 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 DUPD1Q68J44 220 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 CEP128Q6ZU80 1094 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 ZNF534Q76KX8 674 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 SDCCAG8Q86SQ7 713 aaPredicted RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 GKN2Q86XP6 184 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 GALNT13Q8IUC8 556 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 PELI3Q8N2H9 469 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 OR4L1Q8NH43 312 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 SETD7Q8WTS6 366 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 HDAC10Q969S8 669 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 TSACCQ96A04 125 aaPredicted RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 STAMBPL1Q96FJ0 436 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 COPS8Q99627 209 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 LRRC1Q9BTT6 524 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 FAM129AQ9BZQ8 928 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 OR2AG1Q9H205 316 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 DPH5Q9H2P9 285 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 SLC32A1Q9H598 525 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 CARS2Q9HA77 564 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A7Q9HAW7 530 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A10Q9HAW8 530 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 UGT1A8Q9HAW9 530 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 IL21RQ9HBE5 538 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 RXFP3Q9NSD7 469 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 TRNAU1APQ9NX07 287 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 SYBUQ9NX95 663 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 ZNHIT2Q9UHR6 403 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 CNOT6Q9ULM6 557 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 TMEM98Q9Y2Y6 226 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 ASCC3Q8N3C0 2202 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 CCDC78A2IDD5 438 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 KLHL33A6NCF5 533 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 SCAMP1O15126 338 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 AQP9O43315 295 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 NUAK1O60285 661 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 PIAS2O75928 621 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 S1PR4O95977 384 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 ANXA6P08133 673 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 VCLP18206 1134 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 DGKAP23743 735 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 PMLP29590 882 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 MAGEA3P43357 314 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 GNPDA1P46926 289 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.53
SNCA-202ENST00000345009 XIAPP98170 497 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 ACVR1Q04771 509 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 TMEM115Q12893 351 aaPredicted RBP11.71□□□□□ -0.53
SNCA-202ENST00000345009 KCTD19Q17RG1 926 aaPredicted RBP11.71□□□□□ -0.53
SNCA-202ENST00000345009 BBS9Q3SYG4 887 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 GPRC6AQ5T6X5 926 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 MRNIPQ6NTE8 343 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 LVRNQ6Q4G3 990 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 KDM7AQ6ZMT4 941 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 CENPUQ71F23 418 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 TRIM74Q86UV6 250 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 NXPE1Q8N323 547 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 ZNF548Q8NEK5 533 aaPredicted RBP11.71□□□□□ -0.53
SNCA-202ENST00000345009 DDHD1Q8NEL9 900 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 OR13J1Q8NGT2 312 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 OR2I1PQ8NGU4 316 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 LMX1AQ8TE12 382 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 SAP25Q8TEE9 199 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 OR1E3Q8WZA6 343 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 GLMNQ92990 594 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 SCARF2Q96GP6 870 aaPredicted RBP11.71□□□□□ -0.53
SNCA-202ENST00000345009 SGSM3Q96HU1 749 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 CDC6Q99741 560 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 CARD6Q9BX69 1037 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 GSDMCQ9BYG8 508 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 TSPYL1Q9H0U9 437 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 SUDS3Q9H7L9 328 aaPredicted RBP11.71□□□□□ -0.53
SNCA-202ENST00000345009 FGF22Q9HCT0 170 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 FAM114A2Q9NRY5 505 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 NCKIPSDQ9NZQ3 722 aa11.71□□□□□ -0.53
SNCA-202ENST00000345009 SUFUQ9UMX1 484 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms