RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MIF4GDA9UHW6 222 aaKnown RBP14.26□□□□□ -0.13
HMGN3-202ENST00000344726 GPR39O43194 453 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 KLK10O43240 276 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 GRID2O43424 1007 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 BUD23O43709 281 aaKnown RBP14.26□□□□□ -0.13
HMGN3-202ENST00000344726 MTX2O75431 263 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 TJP3O95049 919 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 SLC25A14O95258 325 aaPredicted RBP14.26□□□□□ -0.13
HMGN3-202ENST00000344726 ACP5P13686 325 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 HLA-DPA1P20036 260 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 ADRA1AP35348 466 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 ETV5P41161 510 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 CFHR1Q03591 330 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 CLN3Q13286 438 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 PTPRCAPQ14761 206 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 ATP13A5Q4VNC0 1218 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 PDPK2PQ6A1A2 396 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 DARS2Q6PI48 645 aaKnown RBP14.26□□□□□ -0.13
HMGN3-202ENST00000344726 SYCE1Q8N0S2 351 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 BLOC1S5Q8TDH9 187 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 SLC37A2Q8TED4 501 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 PLEKHG4BQ96PX9 1271 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 SRPK1Q96SB4 655 aaKnown RBP14.26□□□□□ -0.13
HMGN3-202ENST00000344726 APOL2Q9BQE5 337 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 FICDQ9BVA6 458 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 TRABDQ9H4I3 376 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 RMI1Q9H9A7 625 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 TRIM39Q9HCM9 518 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 IL26Q9NPH9 171 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 RAD18Q9NS91 495 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 SLC23A2Q9UGH3 650 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 LOXL2Q9Y4K0 774 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 RHPN2P1A8MT19 583 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 GAPDHSO14556 408 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-202ENST00000344726 CHUKO15111 745 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 PRB1P04280 392 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 CD1CP29017 333 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 ALDH4A1P30038 563 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 SLC5A2P31639 672 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 CSF2RBP32927 897 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 CETN2P41208 172 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 GEMP55040 296 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 MSLNQ13421 630 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-202ENST00000344726 AMZ1Q400G9 498 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 NKAIN2Q5VXU1 208 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 ITPRIPL1Q6GPH6 555 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 RANBP10Q6VN20 620 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 USP53Q70EK8 1073 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 GLT6D1Q7Z4J2 308 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 ZNF761Q86XN6 746 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-202ENST00000344726 PHYKPLQ8IUZ5 450 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 ZNF547Q8IVP9 402 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 TXLNBQ8N3L3 684 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 SFRP1Q8N474 314 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 SPATA13Q96N96 652 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 TMEM74Q96NL1 305 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 VPS35Q96QK1 796 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 UBL7Q96S82 380 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-202ENST00000344726 FSD1LQ9BXM9 530 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 HACD3Q9P035 362 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 TMEM9Q9P0T7 183 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 PISDQ9UG56 409 aa14.25□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A9O60656 530 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 C1QL1O75973 258 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 ANXA9O76027 345 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A6P19224 532 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A1P22309 533 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A4P22310 534 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A3P35503 534 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 MLLT3P42568 568 aaPredicted RBP14.24□□□□□ -0.13
HMGN3-202ENST00000344726 FASLGP48023 281 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 GDF10P55107 478 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 GSDMDP57764 484 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 SRSF6Q13247 344 aaKnown RBP14.24□□□□□ -0.13
HMGN3-202ENST00000344726 EIF3IQ13347 325 aaKnown RBP14.24□□□□□ -0.13
HMGN3-202ENST00000344726 PEX6Q13608 980 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 CHRNA6Q15825 494 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 PLA2G4EQ3MJ16 856 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 MAP9Q49MG5 647 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.24□□□□□ -0.13
HMGN3-202ENST00000344726 ARHGAP40Q5TG30 622 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 CRTC3Q6UUV7 619 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 GPR155Q7Z3F1 870 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 KLHDC8BQ8IXV7 354 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 RNF10Q8N5U6 811 aaKnown RBP14.24□□□□□ -0.13
HMGN3-202ENST00000344726 RCBTB1Q8NDN9 531 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 PMEPA1Q969W9 287 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 DPH1Q9BZG8 443 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 STRADBQ9C0K7 418 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A7Q9HAW7 530 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A10Q9HAW8 530 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 UGT1A8Q9HAW9 530 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 PRDM8Q9NQV8 689 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 KLC4Q9NSK0 619 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 FOXJ2Q9P0K8 574 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 GUCA1BQ9UMX6 200 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 KCTD3Q9Y597 815 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms