RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PPIL1Q9Y3C6 166 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PCDHGB2Q9Y5G2 931 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 HS3ST3A1Q9Y663 406 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PCNX2A6NKB5 2137 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 A0A1W2PRQ8 180 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 TTC24A2A3L6 582 aaPredicted RBP10.27□□□□□ -0.77
TPM3-207ENST00000341372 IGLON5A6NGN9 336 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 KCNK1O00180 336 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 TLR4O00206 839 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 SLC31A1O15431 190 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 DFNA5O60443 496 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 PGLSO95336 258 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 GHRHP01286 108 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 CCDC175P0C221 793 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 ITIH2P19823 946 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 CD247P20963 164 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 CSRP1P21291 193 aaKnown RBP10.27□□□□□ -0.77
TPM3-207ENST00000341372 XPAP23025 273 aaPredicted RBP10.27□□□□□ -0.77
TPM3-207ENST00000341372 C21orf59P57076 290 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 POLR2LP62875 67 aaKnown RBP10.27□□□□□ -0.77
TPM3-207ENST00000341372 CYP4F3Q08477 520 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 SLC14A2Q15849 920 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 KAZNQ674X7 775 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 DPPA4Q7L190 304 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 PEX26Q7Z412 305 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 CCDC50Q8IVM0 306 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 OR8H2Q8N162 312 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 CCNYQ8ND76 341 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 CXorf40AQ8TE69 158 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 KLK6Q92876 244 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 MCCC1Q96RQ3 725 aaPredicted RBP10.27□□□□□ -0.77
TPM3-207ENST00000341372 TDRD1Q9BXT4 1180 aaKnown RBP10.27□□□□□ -0.77
TPM3-207ENST00000341372 OSBPL8Q9BZF1 889 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 GAREM1Q9H706 876 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 IL21RQ9HBE5 538 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 FZD3Q9NPG1 666 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 GPRC5BQ9NZH0 403 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 WHRNQ9P202 907 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 CGGBP1Q9UFW8 167 aaPredicted RBP10.27□□□□□ -0.77
TPM3-207ENST00000341372 PCDHGC4Q9Y5F7 938 aa10.27□□□□□ -0.77
TPM3-207ENST00000341372 A0A1B0GTQ1 180 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 RAD51BO15315 384 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 CLEC3AO75596 197 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 TM7SF2O76062 418 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 JCHAINP01591 159 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 MMP2P08253 660 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 CD59P13987 128 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 PRIM2P49643 509 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 DSC2Q02487 901 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 TNP2Q05952 138 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 NIPAL4Q0D2K0 466 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 XRCC4Q13426 336 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 NOMO1Q15155 1222 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 DNTTIP2Q5QJE6 756 aaKnown RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 MCATQ8IVS2 390 aaKnown RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 OXR1Q8N573 874 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 TP53I13Q8NBR0 393 aaPredicted RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 PIH1D2Q8WWB5 315 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 JADE3Q92613 823 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 P3H4Q92791 437 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 KIAA1191Q96A73 305 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 TADA1Q96BN2 335 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 CENPTQ96BT3 561 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 RCC1LQ96I51 464 aaKnown RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 QKIQ96PU8 341 aaKnown RBP eCLIP10.26□□□□□ -0.778e-8■■■■■ 32.5
TPM3-207ENST00000341372 GDF3Q9NR23 364 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 SAE1Q9UBE0 346 aaPredicted RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 CA5BQ9Y2D0 317 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 RAI2Q9Y5P3 530 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 HACD1B0YJ81 288 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 H0Y8X5 98 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 AQP7O14520 342 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 TOR1BO14657 336 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 MTSS1O43312 755 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 FTCDO95954 541 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 PAK4O96013 591 aaPredicted RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 C6P13671 934 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 PTPN3P26045 913 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 CCT8P50990 548 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 PFN3P60673 137 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 AP1B1Q10567 949 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 ARMC12Q5T9G4 340 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 ARHGEF39Q8N4T4 335 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 UBL4BQ8N7F7 174 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 TFB1MQ8WVM0 346 aaKnown RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 BMFQ96LC9 184 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 WDR24Q96S15 920 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 ELF4Q99607 663 aaPredicted RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 WRAP53Q9BUR4 548 aaKnown RBP10.26□□□□□ -0.77
TPM3-207ENST00000341372 ADAM19Q9H013 955 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 VPS11Q9H270 941 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 TM7SF3Q9NS93 570 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 GUCA1BQ9UMX6 200 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 LRCH1Q9Y2L9 728 aa10.26□□□□□ -0.77
TPM3-207ENST00000341372 COL5A1P20908 1838 aaPredicted RBP10.25□□□□□ -0.77
TPM3-207ENST00000341372 YKT6O15498 198 aa10.25□□□□□ -0.77
TPM3-207ENST00000341372 PRLP01236 227 aa10.25□□□□□ -0.77
TPM3-207ENST00000341372 PRKCGP05129 697 aa10.25□□□□□ -0.77
TPM3-207ENST00000341372 SNRPB2P08579 225 aaKnown RBP10.25□□□□□ -0.77
TPM3-207ENST00000341372 THEGLP0DJG4 465 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms