RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SERPINA4P29622 427 aa11□□□□□ -0.65
LRP1-202ENST00000338962 CACNG1Q06432 222 aa11□□□□□ -0.65
LRP1-202ENST00000338962 PFKFB4Q16877 469 aa11□□□□□ -0.65
LRP1-202ENST00000338962 KHDC1Q4VXA5 237 aaKnown RBP11□□□□□ -0.65
LRP1-202ENST00000338962 STK40Q8N2I9 435 aa11□□□□□ -0.65
LRP1-202ENST00000338962 ENDOVQ8N8Q3 282 aaKnown RBP11□□□□□ -0.65
LRP1-202ENST00000338962 CEP70Q8NHQ1 597 aa11□□□□□ -0.65
LRP1-202ENST00000338962 WDR60Q8WVS4 1066 aa11□□□□□ -0.65
LRP1-202ENST00000338962 PIH1D2Q8WWB5 315 aa11□□□□□ -0.65
LRP1-202ENST00000338962 CLPTM1LQ96KA5 538 aa11□□□□□ -0.65
LRP1-202ENST00000338962 LENG8Q96PV6 779 aaPredicted RBP11□□□□□ -0.65
LRP1-202ENST00000338962 TNKS2Q9H2K2 1166 aa11□□□□□ -0.65
LRP1-202ENST00000338962 ZFYVE1Q9HBF4 777 aa11□□□□□ -0.65
LRP1-202ENST00000338962 SPATS2LQ9NUQ6 558 aaKnown RBP11□□□□□ -0.65
LRP1-202ENST00000338962 RNF112Q9ULX5 631 aa11□□□□□ -0.65
LRP1-202ENST00000338962 G3BP2Q9UN86 482 aaKnown RBP11□□□□□ -0.65
LRP1-202ENST00000338962 OAS3Q9Y6K5 1087 aaKnown RBP11□□□□□ -0.65
LRP1-202ENST00000338962 A0A0J9YYE9 177 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 C1orf232A0A0U1RR37 186 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 ANHXE9PGG2 379 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 UBXN8O00124 270 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 NIPSNAP2O75323 286 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 PRAMEF12O95522 483 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 TRBC1P01850 177 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 ESR1P03372 595 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 THRAP10827 490 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 IL9P15248 144 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 FCARP24071 287 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 GKP32189 559 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 PTGER3P43115 390 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 CSNK1DP48730 415 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 ADARP55265 1226 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 CUL3Q13618 768 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 TRMT5Q32P41 509 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 ACSBG2Q5FVE4 666 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 APLFQ8IW19 511 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 NKAPQ8N5F7 415 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 CELF5Q8N6W0 485 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 OR2AP1Q8NGE2 309 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 KCNJ9Q92806 393 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 KIAA1191Q96A73 305 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 MAELQ96JY0 434 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 RPL10LQ96L21 214 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 CATSPER2Q96P56 530 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 ASB2Q96Q27 587 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 ATOH8Q96SQ7 321 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 NKX1-2Q9UD57 310 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 SLC7A8Q9UHI5 535 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 INTS6Q9UL03 887 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 COMMD10Q9Y6G5 202 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 GOLGA8CPA6NN73 597 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 SYCE1LA8MT33 242 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 SUPT3HB4E1H0 165 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 C2CD4DB7Z1M9 353 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 LOC730098B7Z3J9 87 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 BTN3A1O00481 513 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 GPR39O43194 453 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 HTRA2O43464 458 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 SUPT3HO75486 399 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 PRAMEF1O95521 474 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 BMP1P13497 986 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 CHRM3P20309 590 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 PIK3R1P27986 724 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 HLA-FP30511 346 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 ADSLP30566 484 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 STK19P49842 368 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 SNRPD1P62314 119 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 XIAPP98170 497 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 BTKQ06187 659 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 TAF11Q15544 211 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 TSNQ15631 228 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 SETMARQ53H47 684 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 PITRM1Q5JRX3 1037 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 DGKKQ5KSL6 1271 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 CTSL3PQ5NE16 218 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 C1orf146Q5VVC0 180 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 TMEM198Q66K66 360 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 CERS6Q6ZMG9 384 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 NET1Q7Z628 596 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 CPSF7Q8N684 471 aaKnown RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 ZNF483Q8TF39 744 aaPredicted RBP10.99□□□□□ -0.65
LRP1-202ENST00000338962 NXPE3Q969Y0 559 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 EID2BQ96D98 161 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 RTKNQ9BST9 563 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 ZFP14Q9HCL3 533 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 MRGBPQ9NV56 204 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 TRAF6Q9Y4K3 522 aa10.99□□□□□ -0.65
LRP1-202ENST00000338962 DOCK6Q96HP0 2047 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 RGSL1A5PLK6 1076 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 SDHDO14521 159 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 ECI2O75521 394 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 ZNF821O75541 412 aaPredicted RBP10.98□□□□□ -0.65
LRP1-202ENST00000338962 SIX3O95343 332 aaPredicted RBP10.98□□□□□ -0.65
LRP1-202ENST00000338962 SRCP12931 536 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 MTHFD2P13995 350 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 TSPAN8P19075 237 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 CD9P21926 228 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 PAX7P23759 505 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 CDH13P55290 713 aa10.98□□□□□ -0.65
LRP1-202ENST00000338962 IL2P60568 153 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms