RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TREML1Q86YW5 311 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 AADATQ8N5Z0 425 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 MRGPRX2Q96LB1 330 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 C9orf16Q9BUW7 83 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 AHSPQ9NZD4 102 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PADI4Q9UM07 663 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 MYRFQ9Y2G1 1151 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 UBR2Q8IWV8 1755 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 C1QTNF3-AMACRE9PGA6 284 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 H3BM21 787 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ITGBL1O95965 494 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ITPKAP23677 461 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 DNAJB1P25685 340 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 TNFAIP8L3Q5GJ75 292 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 LYSMD3Q7Z3D4 306 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF276Q8N554 614 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SMG7Q92540 1137 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SLC7A6OSQ96CW6 309 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ERLEC1Q96DZ1 483 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 NWD2Q9ULI1 1742 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 NTRK1P04629 796 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CLTBP09497 229 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 NIPAL4Q0D2K0 466 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 PDK3Q15120 406 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 IL23RQ5VWK5 629 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ADCY4Q8NFM4 1077 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 TIFAQ96CG3 184 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 AP2M1Q96CW1 435 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 MAGED4Q96JG8 741 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 TEX12Q9BXU0 123 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 GIMAP4Q9NUV9 329 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ASF1AQ9Y294 204 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 POLR3HQ9Y535 204 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 MAP1BP46821 2468 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CAPN8A6NHC0 703 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 RPN2P04844 631 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 FGFR3P22607 806 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 GNPDA1P46926 289 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 TRIM25Q14258 630 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CLLU1OSQ5K130 101 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ATG16L2Q8NAA4 619 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 OVCA2Q8WZ82 227 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 REPS1Q96D71 796 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SUV39H2Q9H5I1 410 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SLC28A3Q9HAS3 691 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 MTRRQ9UBK8 725 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CLCA2Q9UQC9 943 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 INSL5Q9Y5Q6 135 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ANKDD1BA6NHY2 528 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 RFXANKO14593 260 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CCR10P46092 362 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 POLR2JP52435 117 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 GSTA3Q16772 222 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 GPR33Q49SQ1 333 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 RPS27LQ71UM5 84 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CILP2Q8IUL8 1156 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ABTB1Q969K4 478 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 LRTM1Q9HBL6 345 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SMNDC1O75940 238 aaKnown RBP eCLIP6.24□□□□□ -1.416e-8■■■□□ 19.1
PRKDC-202ENST00000338368 DHRS4L1P0CG22 281 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 MAGEA6P43360 314 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SEMG2Q02383 582 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 C2CD4AQ8NCU7 369 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 HIC2Q96JB3 615 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 DNAJC11Q9NVH1 559 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 NLE1Q9NVX2 485 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 USP3Q9Y6I4 520 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ITGAXP20702 1163 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 DMC1Q14565 340 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 NAPRTQ6XQN6 538 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SPPL2CQ8IUH8 684 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 RAVER1Q8IY67 606 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 OTUB1Q96FW1 271 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 ACAT2Q9BWD1 397 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 KATNBL1Q9H079 304 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 PAPOLBQ9NRJ5 636 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 PSMD13Q9UNM6 376 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SIPA1L3O60292 1781 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SLC22A2O15244 555 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 TBX10O75333 385 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 FYNP06241 537 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 USP46P62068 366 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 XIAPP98170 497 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CYP2A13Q16696 494 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 PAGE2BQ5JRK9 111 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SULT1C3Q6IMI6 304 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CLP1Q92989 425 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 C1orf21Q9H246 121 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 WASF2Q9Y6W5 498 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SCN7AQ01118 1682 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 DHRS12A0PJE2 317 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CST5P28325 142 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 XKR4Q5GH76 650 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 SCML4Q8N228 414 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 PHTF2Q8N3S3 785 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 TRPV1Q8NER1 839 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 MAGEE2Q8TD90 523 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 CCDC106Q9BWC9 280 aa6.24□□□□□ -1.41
PRKDC-202ENST00000338368 FBRSL1Q9HCM7 1045 aaKnown RBP6.24□□□□□ -1.41
PRKDC-202ENST00000338368 FGF18O76093 207 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms