RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CASP14P31944 242 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 LEPRP48357 1165 aaKnown RBP11.33□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF165P49910 485 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 DNASE1L3Q13609 305 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 ANKRD20A8PQ5CZ79 823 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 TIGD7Q6NT04 549 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF571Q7Z3V5 609 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-202ENST00000338325 PRSS42Q7Z5A4 293 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 APLFQ8IW19 511 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-202ENST00000338325 GALNT11Q8NCW6 608 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 CCHCR1Q8TD31 782 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 ELMO2Q96JJ3 720 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 CHMP5Q9NZZ3 219 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-202ENST00000338325 RCOR3Q9P2K3 495 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-202ENST00000338325 AMACRQ9UHK6 382 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 SLC30A1Q9Y6M5 507 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 UNC79Q9P2D8 2635 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 SHANK1Q9Y566 2161 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 PIPSLA2A3N6 862 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 TTLL8A6PVC2 850 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 GPR89AB7ZAQ6 455 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSMD2-202ENST00000338325 MATN3O15232 486 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 SPAG6O75602 509 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 GPR89BP0CG08 455 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 CAPZBP47756 277 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 SLC25A11Q02978 314 aaKnown RBP11.32□□□□□ -0.6
CSMD2-202ENST00000338325 GALNT2Q10471 571 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 PIGHQ14442 188 aaPredicted RBP11.32□□□□□ -0.6
CSMD2-202ENST00000338325 KRT81Q14533 505 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 INSCQ1MX18 579 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF569Q5MCW4 686 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 CYB5D1Q6P9G0 228 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 RBM43Q6ZSC3 357 aaKnown RBP11.32□□□□□ -0.6
CSMD2-202ENST00000338325 PPP1R3BQ86XI6 285 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 ARRDC2Q8TBH0 407 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 CPT1CQ8TCG5 803 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 CT55Q8WUE5 264 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 OR2AG1Q9H205 316 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 ARFGAP3Q9NP61 516 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 LHX9Q9NQ69 397 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 RBM22Q9NW64 420 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF624Q9P2J8 865 aaPredicted RBP11.32□□□□□ -0.6
CSMD2-202ENST00000338325 PADI1Q9ULC6 663 aa11.32□□□□□ -0.6
CSMD2-202ENST00000338325 C21orf140B9A014 251 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 DNAJB5O75953 348 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 HLA-DQB2P05538 268 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 IL4RP24394 825 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 SLC19A1P41440 591 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 PRKCIP41743 596 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 NIPAL4Q0D2K0 466 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 SEMA5AQ13591 1074 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 PAFAH1B3Q15102 231 aaKnown RBP11.31□□□□□ -0.6
CSMD2-202ENST00000338325 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
CSMD2-202ENST00000338325 QPCTQ16769 361 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 PLA2G4EQ3MJ16 856 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 TDRD12Q587J7 1177 aaKnown RBP11.31□□□□□ -0.6
CSMD2-202ENST00000338325 CCDC122Q5T0U0 273 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF648Q5T619 568 aaPredicted RBP11.31□□□□□ -0.6
CSMD2-202ENST00000338325 CACHD1Q5VU97 1274 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 NCBP2-AS2Q69YL0 99 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 CRTC3Q6UUV7 619 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 NIPA2Q8N8Q9 360 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 SSC4DQ8WTU2 575 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 KLHL6Q8WZ60 621 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 SEC14L1Q92503 715 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 RSC1A1Q92681 617 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 FATE1Q969F0 183 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 MLPHQ9BV36 600 aaPredicted RBP11.31□□□□□ -0.6
CSMD2-202ENST00000338325 SPATA16Q9BXB7 569 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 TRIM55Q9BYV6 548 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 BRD8Q9H0E9 1235 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 HSD3B7Q9H2F3 369 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 ACTL8Q9H568 366 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 TRIM39Q9HCM9 518 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 POT1Q9NUX5 634 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 ANO10Q9NW15 660 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 AIPL1Q9NZN9 384 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 MYO9AB2RTY4 2548 aa11.31□□□□□ -0.6
CSMD2-202ENST00000338325 PDZK1P1A8MUH7 402 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ANKRD66B4E2M5 251 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 CHUKO15111 745 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 KMOO15229 486 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 KIF1CO43896 1103 aaKnown RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 SLC25A14O95258 325 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 TIAF1O95411 115 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 CD48P09326 243 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 NELFEP18615 380 aaKnown RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 CCNCP24863 283 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 PGDP52209 483 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 KLHL30Q0D2K2 578 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 SEPT7Q16181 437 aaKnown RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 STX1AQ16623 288 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms