RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RETSATQ6NUM9 610 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 DSELQ8IZU8 1212 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 OR52B6Q8NGF0 335 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 SCAMP4Q969E2 229 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 CMTM5Q96DZ9 223 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 SPDL1Q96EA4 605 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 LRRC3BQ96PB8 259 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 PIF1Q9H611 641 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 IL23AQ9NPF7 189 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 IL26Q9NPH9 171 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 PARNO95453 639 aaKnown RBP12.48□□□□□ -0.41
LIMK1-201ENST00000336180 BPIP17213 487 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 XRCC1P18887 633 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-201ENST00000336180 THOP1P52888 689 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 XIAPP98170 497 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 RAD51Q06609 339 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 MUM1Q2TAK8 710 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 LILRA6Q6PI73 481 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 CDYL2Q8N8U2 506 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 LMNTD1Q8N9Z9 388 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 DCAF4L2Q8NA75 395 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 GPR26Q8NDV2 337 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 GABPB2Q8TAK5 448 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-201ENST00000336180 ITFG1Q8TB96 612 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 CD200R1Q8TD46 325 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 FOXJ1Q92949 421 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 ASIC4Q96FT7 647 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 ATOH8Q96SQ7 321 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 NMRK1Q9NWW6 199 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 CRLS1Q9UJA2 301 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 DNAJC15Q9Y5T4 150 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 ATG2BQ96BY7 2078 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 NOTCH4Q99466 2003 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 DNAJA2O60884 412 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 TYRP14679 529 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 GNAZP19086 355 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 IMPDH1P20839 514 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 PPARGP37231 505 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 KPNA2P52292 529 aaKnown RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ART3Q13508 389 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 MMEL1Q495T6 779 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 LRRC66Q68CR7 880 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 TMEM215Q68D42 235 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ALG1LQ6GMV1 187 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 BEND7Q8N7W2 519 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 FATE1Q969F0 183 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 FUBP1Q96AE4 644 aaKnown RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 PCDHAC1Q9H158 963 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ARHGAP26Q9UNA1 814 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 SPEGQ15772 3267 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 TTC34A8MYJ7 566 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 FFAR3O14843 346 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 GPR42O15529 346 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 VPS26AO75436 327 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ALDOCP09972 364 aaKnown RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 PPM1AP35813 382 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 RBM12BQ8IXT5 1001 aaKnown RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 TUBB1Q9H4B7 451 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 AKTIPQ9H8T0 292 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 PRM3Q9NNZ6 103 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ADAMTS6Q9UKP5 1117 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ITM2BQ9Y287 266 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 NR5A2O00482 541 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 UBDO15205 165 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 MOSPD3O75425 235 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 SLC25A14O95258 325 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 CEBPBP17676 345 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 LHCGRP22888 699 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 GGT5P36269 586 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 DIO3P55073 304 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 HERVK_113P63132 956 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 CAMK1Q14012 370 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 CCNIQ14094 377 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 TYSND1Q2T9J0 566 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 FBXO46Q6PJ61 603 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 RNF111Q6ZNA4 994 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ADGRD2Q7Z7M1 963 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 MTFMTQ96DP5 389 aaKnown RBP12.47□□□□□ -0.41
LIMK1-201ENST00000336180 CNDP1Q96KN2 507 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 KLHL32Q96NJ5 620 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 ERVK-6Q9BXR3 956 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 POMPQ9Y244 141 aa12.47□□□□□ -0.41
LIMK1-201ENST00000336180 GAPDHSO14556 408 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-201ENST00000336180 NPHS1O60500 1241 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 OR4F21O95013 312 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 WISP3O95389 354 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF24P17028 368 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 COL9A2Q14055 689 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-201ENST00000336180 FASTKQ14296 549 aaKnown RBP12.46□□□□□ -0.41
LIMK1-201ENST00000336180 DNAL1Q4LDG9 190 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 TMEM240Q5SV17 173 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 CYP2R1Q6VVX0 501 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 TWIST2Q8WVJ9 160 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 C17orf50Q8WW18 174 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms