RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CHSY3Q70JA7 882 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 BEND5Q7L4P6 421 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 OR9I1Q8NGQ6 314 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 FAR2Q96K12 515 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 MRPL57Q9BQC6 102 aaKnown RBP13.8□□□□□ -0.2
SF1-202ENST00000334944 MOSPD1Q9UJG1 213 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 ACOT8O14734 319 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 BCAS2O75934 225 aaPredicted RBP13.8□□□□□ -0.2
SF1-202ENST00000334944 SUPT7LO94864 414 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 BCL10O95999 233 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 ATP5BP06576 529 aaKnown RBP13.8□□□□□ -0.2
SF1-202ENST00000334944 RAD23AP54725 363 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 IFITM3Q01628 133 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 IFITM2Q01629 132 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 FAM83EQ2M2I3 478 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 INAVAQ3KP66 663 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 KLHDC8BQ8IXV7 354 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 CBR4Q8N4T8 237 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 BTN2A3PQ96KV6 586 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 TMEM248Q9NWD8 314 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 CCDC167Q9P0B6 97 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.8□□□□□ -0.2
SF1-202ENST00000334944 MID2Q9UJV3 735 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 ERVK-11Q9UQG0 969 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 VWA7Q9Y334 891 aa13.8□□□□□ -0.2
SF1-202ENST00000334944 MTMR11A4FU01 709 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 RGSL1A5PLK6 1076 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 SDHDO14521 159 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 KRT75O95678 551 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 IRF1P10914 325 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 MAGP20916 626 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 SLC6A4P31645 630 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 POLR2IP36954 125 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 HPCAL1P37235 193 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 ARL1P40616 181 aaPredicted RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 RGRP47804 291 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 SLC11A1P49279 550 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 TUBA4AP68366 448 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 POU4F1Q01851 419 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 PTK2BQ14289 1009 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 ZNF235Q14590 738 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 TECRLQ5HYJ1 363 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 KIAA2013Q8IYS2 634 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 ATP6V0D2Q8N8Y2 350 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 RDH11Q8TC12 318 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 C1orf74Q96LT6 269 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 CTRCQ99895 268 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 GKN1Q9NS71 199 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 RIC8BQ9NVN3 520 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 UBA6A0AVT1 1052 aaPredicted RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 UBFD1O14562 309 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 LDB2O43679 373 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 TSPAN3O60637 253 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 GJB5O95377 273 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 S1PR4O95977 384 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 GOT2P00505 430 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 ATXN1LP0C7T5 689 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 EEF1B2P24534 225 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 ATP5F1P24539 256 aaPredicted RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 CD99L2Q8TCZ2 262 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 SLCO4A1Q96BD0 722 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 PTERQ96BW5 349 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 C8orf48Q96LL4 319 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 STARD7Q9NQZ5 370 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 PRPF19Q9UMS4 504 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 FAM50BQ9Y247 325 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 DOCK4Q8N1I0 1966 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 CCDC162PA2VCL2 907 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 KPNA4O00629 521 aaPredicted RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 GPR39O43194 453 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 NBNO60934 754 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 H2AFYO75367 372 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 LTA4HP09960 611 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 SLC2A3P11169 496 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 BMP1P13497 986 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 CCNA2P20248 432 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 CDKN1CP49918 316 aaPredicted RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 NHSL2Q5HYW2 709 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 HM13Q8TCT9 377 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 BCL7CQ8WUZ0 217 aaPredicted RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 LPGAT1Q92604 370 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 RPL10LQ96L21 214 aaKnown RBP13.79□□□□□ -0.2
SF1-202ENST00000334944 SLC39A3Q9BRY0 314 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 CCDC68Q9H2F9 335 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 AURKCQ9UQB9 309 aa13.79□□□□□ -0.2
SF1-202ENST00000334944 IPO13O94829 963 aaKnown RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 EOMESO95936 686 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 DNAJB2P25686 324 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 SGSHP51688 502 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 SERINC3Q13530 473 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 OXA1LQ15070 435 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 GEN1Q17RS7 908 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 ZNF549Q6P9A3 640 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 CUZD1Q86UP6 607 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 DENND1CQ8IV53 801 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms