RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 HACD4Q5VWC8 232 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF773Q6PK81 442 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 USP30Q70CQ3 517 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CBR4Q8N4T8 237 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PTGR2Q8N8N7 351 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 METTL8Q9H825 291 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 AFDNP55196 1824 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TEX51A0A1B0GUA7 166 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SH3PXD2BA1X283 911 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 NR2F1P10589 423 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TGFB3P10600 412 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 RPS12P25398 132 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 BAG6P46379 1132 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 LINGO2Q7L985 606 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ADGRD2Q7Z7M1 963 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FITM2Q8N6M3 262 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 C11orf65Q8NCR3 313 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 OR6J1Q8NGC5 347 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TRUB1Q8WWH5 349 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 KCNN1Q92952 543 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FKBP10Q96AY3 582 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 MARK4Q96L34 752 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 COPS4Q9BT78 406 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 BHLHE41Q9C0J9 482 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 HPF1Q9NWY4 346 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 MRPS7Q9Y2R9 242 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TRPV2Q9Y5S1 764 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 POLRMTO00411 1230 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 KDM4BO94953 1096 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 KAT7O95251 611 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CKBP12277 381 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PROZP22891 400 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PPCDCQ96CD2 204 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 MAPKAP1Q9BPZ7 522 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PCBD2Q9H0N5 130 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 RDH8Q9NYR8 311 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF510Q9Y2H8 683 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PCDHB7Q9Y5E2 793 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 M0R036 132 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 AKAP3O75969 853 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SSTR3P32745 418 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CHKAP35790 457 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT2B10P36537 528 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PPP2R2BQ00005 443 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 EFCAB12Q6NXP0 572 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 RTL4Q6ZR62 310 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PNLDC1Q8NA58 520 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SEC14L1Q92503 715 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SLCO2A1Q92959 643 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TRNT1Q96Q11 434 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PIF1Q9H611 641 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SCP2D1Q9UJQ7 156 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 C14orf166Q9Y224 244 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 MRPS33Q9Y291 106 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TNFRSF11BO00300 401 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 FBP2O00757 339 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SLC37A4O43826 429 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 KERAO60938 352 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SLITRK5O94991 958 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 FCER2P06734 321 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 PEX2P28328 305 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 EPHA3P29320 983 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 PRDX5P30044 214 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SEPHS1P49903 392 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 KCNT2Q6UVM3 1135 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 C2orf69Q8N8R5 385 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 UBA3Q8TBC4 463 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SETD6Q8TBK2 473 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 GAL3ST3Q96A11 431 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 NSMCE3Q96MG7 304 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 HSPA12BQ96MM6 686 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ABCB7O75027 752 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CPNE3O75131 537 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 IFNA2P01563 188 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 APLP1P51693 650 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 PRAMEF17Q5VTA0 474 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF367Q7RTV3 350 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 KIAA0895Q8NCT3 520 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TERB2Q8NHR7 220 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 HAVCR2Q8TDQ0 301 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 HYLS1Q96M11 299 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 RETREG1Q9H6L5 497 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 JCADQ9P266 1359 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SULT1B1O43704 296 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SPARCP09486 303 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 BCL2L1Q07817 233 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 POU4F2Q12837 409 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF404Q494X3 552 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 IDNKQ5T6J7 187 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ARMC12Q5T9G4 340 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SLC26A9Q7LBE3 791 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 AMIGO1Q86WK6 493 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TTLL6Q8N841 843 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 DBNDD1Q9H9R9 158 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 POLR3HQ9Y535 204 aaPredicted RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 MAGEB17A8MXT2 336 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CHURC1-FNTBB4DL54 471 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TIPRLO75663 272 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 SCGNO76038 276 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms