RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CD274Q9NZQ7 290 aa14.73□□□□□ -0.05
CLCNKA-201ENST00000331433 HACD3Q9P035 362 aa14.73□□□□□ -0.05
CLCNKA-201ENST00000331433 MAP10Q9P2G4 905 aa14.73□□□□□ -0.05
CLCNKA-201ENST00000331433 EVLQ9UI08 416 aaPredicted RBP14.73□□□□□ -0.05
CLCNKA-201ENST00000331433 CLEC4EQ9ULY5 219 aa14.73□□□□□ -0.05
CLCNKA-201ENST00000331433 STX16O14662 325 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 KLK8O60259 260 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 SNX2O60749 519 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 HMGCLP35914 325 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 PTGER3P43115 390 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 VEGFBP49765 207 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 CLCN4P51793 760 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 CLCN7P51798 805 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 DEFB103AP81534 67 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 ARHGEF6Q15052 776 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 TLR1Q15399 786 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 AARS2Q5JTZ9 985 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 ARMC12Q5T9G4 340 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 ZNF483Q8TF39 744 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 DDI1Q8WTU0 396 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 PIH1D2Q8WWB5 315 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 HGH1Q9BTY7 390 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 HERC2P3Q9BVR0 1158 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 OGDHLQ9ULD0 1010 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 AK5Q9Y6K8 562 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 SLC30A1Q9Y6M5 507 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 GFRA2O00451 464 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 PGLSO95336 258 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 ESR1P03372 595 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 ITGB6P18564 788 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 CA8P35219 290 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 PRMT2P55345 433 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 YBX1P67809 324 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 CACNG1Q06432 222 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 SAMD4BQ5PRF9 694 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 CNKSR3Q6P9H4 555 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 TCEAL8Q8IYN2 117 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 PAF1Q8N7H5 531 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 DCAF4L2Q8NA75 395 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 TOP1MTQ969P6 601 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 BTBD9Q96Q07 612 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 CDK15Q96Q40 435 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 BOCQ9BWV1 1114 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 P2RY12Q9H244 342 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 MRPL40Q9NQ50 206 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 SDR39U1Q9NRG7 319 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 PDP2Q9P2J9 529 aa14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 DNMT3BQ9UBC3 853 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-201ENST00000331433 TEX28O15482 410 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 ESRRBO95718 433 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 C8BP07358 591 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 CAPRIN1Q14444 709 aaKnown RBP14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 PDK3Q15120 406 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 RPS6KA2Q15349 733 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TGFBIQ15582 683 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 C18orf21Q32NC0 220 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 HACD2Q6Y1H2 254 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TPGS1Q6ZTW0 290 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 GALNT4Q8N4A0 578 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TMEM102Q8N9M5 508 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 PCYOX1LQ8NBM8 494 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 OR52B6Q8NGF0 335 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 C1QTNF3Q9BXJ4 246 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 SEMA6AQ9H2E6 1030 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 MAGEE1Q9HCI5 957 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 OBSL1O75147 1896 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 A8MX80 341 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 E2F3O00716 465 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 ANGPT2O15123 496 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 CSPG5O95196 566 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 PARNO95453 639 aaKnown RBP14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 PRAMEF1O95521 474 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 LATS1O95835 1130 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 CD9P21926 228 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 ADARP55265 1226 aaKnown RBP14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TXNDC11Q6PKC3 985 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 ISLR2Q6UXK2 745 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 FAM43BQ6ZT52 329 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TICAM1Q8IUC6 712 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 ROPN1LQ96C74 230 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 ZNF689Q96CS4 500 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TEX37Q96LM6 180 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TRIM8Q9BZR9 551 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 TNKS2Q9H2K2 1166 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 AP4S1Q9Y587 144 aa14.71□□□□□ -0.05
CLCNKA-201ENST00000331433 PRRC2BQ5JSZ5 2229 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 C1orf232A0A0U1RR37 186 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 BBIP1A8MTZ0 92 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 NRG2O14511 850 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 GAPDHSO14556 408 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 PRMT5O14744 637 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 MLYCDO95822 493 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 OLFM2O95897 454 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 CKMP06732 381 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 GABRR2P28476 465 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 PEX19P40855 299 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 AP1S1P61966 158 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 RHDQ02161 417 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 GAREM2Q75VX8 874 aa14.7□□□□□ -0.06
CLCNKA-201ENST00000331433 BBS7Q8IWZ6 715 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms