RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 MCCC1Q96RQ3 725 aaPredicted RBP16.85■□□□□ 0.29
SSR4-201ENST00000320857 SARS2Q9NP81 518 aaKnown RBP16.85■□□□□ 0.29
SSR4-201ENST00000320857 SLCO3A1Q9UIG8 710 aa16.85■□□□□ 0.29
SSR4-201ENST00000320857 CRLS1Q9UJA2 301 aa16.85■□□□□ 0.29
SSR4-201ENST00000320857 LOC100653049A0A140TA62 436 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 NPIPB15A6NHN6 443 aaPredicted RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 WASH3PC4AMC7 463 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 UBFD1O14562 309 aaKnown RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 KLK8O60259 260 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 KRT34O76011 436 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 PAPLNO95428 1278 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 ACRV1P26436 265 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 NNMTP40261 264 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 POLR2LP62875 67 aaKnown RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 CUL3Q13618 768 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 CHRNA6Q15825 494 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 ANKS6Q68DC2 871 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 NET1Q7Z628 596 aaPredicted RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 CPNE9Q8IYJ1 553 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 ULK2Q8IYT8 1036 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 CELF5Q8N6W0 485 aaKnown RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 RP9Q8TA86 221 aaKnown RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 EEF1AKMT1Q8WVE0 214 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 ING5Q8WYH8 240 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 LENG8Q96PV6 779 aaPredicted RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 IKZF3Q9UKT9 509 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 G3BP2Q9UN86 482 aaKnown RBP16.84■□□□□ 0.29
SSR4-201ENST00000320857 SLC8A2Q9UPR5 921 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 ERVW-1Q9UQF0 538 aa16.84■□□□□ 0.29
SSR4-201ENST00000320857 GPR39O43194 453 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 ENTPD5O75356 428 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 SIX3O95343 332 aaPredicted RBP16.83■□□□□ 0.28
SSR4-201ENST00000320857 UGT2B4P06133 528 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 FGF4P08620 206 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 GM2AP17900 193 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 EEF1DP29692 281 aaKnown RBP16.83■□□□□ 0.28
SSR4-201ENST00000320857 CDH13P55290 713 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 SLC25A3Q00325 362 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 KPNB1Q14974 876 aaKnown RBP16.83■□□□□ 0.28
SSR4-201ENST00000320857 PPP2R2DQ66LE6 453 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 LRRC66Q68CR7 880 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 GDPD4Q6W3E5 623 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 TSPAN33Q86UF1 283 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 GPSM1Q86YR5 675 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 ENDOVQ8N8Q3 282 aaKnown RBP16.83■□□□□ 0.28
SSR4-201ENST00000320857 CFAP61Q8NHU2 1237 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 VOPP1Q96AW1 172 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 C1QTNF3Q9BXJ4 246 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 LMAN2LQ9H0V9 348 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 DCLRE1BQ9H816 532 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 SLC28A3Q9HAS3 691 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 TNFRSF12AQ9NP84 129 aa16.83■□□□□ 0.28
SSR4-201ENST00000320857 NOP53Q9NZM5 478 aaKnown RBP16.83■□□□□ 0.28
SSR4-201ENST00000320857 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.83■□□□□ 0.28
SSR4-201ENST00000320857 LAMA3Q16787 3333 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 A0A1W2PPC1 479 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 SNX2O60749 519 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 CDK14O94921 469 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 RPS17P08708 135 aaKnown RBP16.82■□□□□ 0.28
SSR4-201ENST00000320857 WEE1P30291 646 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 RGS4P49798 205 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 CLCQ05315 142 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 LCP2Q13094 533 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 CYLC2Q14093 348 aaPredicted RBP16.82■□□□□ 0.28
SSR4-201ENST00000320857 DUSP6Q16828 381 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 TRMT5Q32P41 509 aaKnown RBP16.82■□□□□ 0.28
SSR4-201ENST00000320857 LRIT3Q3SXY7 679 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 TMEM198Q66K66 360 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 Q6ZVU0 165 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 SNX32Q86XE0 403 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 SMG7Q92540 1137 aaKnown RBP16.82■□□□□ 0.28
SSR4-201ENST00000320857 TIFAQ96CG3 184 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 ZBTB26Q9HCK0 441 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 MID1IP1Q9NPA3 183 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 NUDT4Q9NZJ9 180 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 L3MBTL1Q9Y468 752 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 COPG1Q9Y678 874 aaKnown RBP16.82■□□□□ 0.28
SSR4-201ENST00000320857 MYOFQ9NZM1 2061 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 ATG2AQ2TAZ0 1938 aa16.82■□□□□ 0.28
SSR4-201ENST00000320857 IQCF5A8MTL0 148 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 A8MX80 341 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 SOX1O00570 391 aaPredicted RBP16.81■□□□□ 0.28
SSR4-201ENST00000320857 AZIN1O14977 448 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 GPC4O75487 556 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 CHRM1P11229 460 aaPredicted RBP16.81■□□□□ 0.28
SSR4-201ENST00000320857 BMP1P13497 986 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 TSPAN8P19075 237 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 UGT1A6P19224 532 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 ITGAXP20702 1163 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 UGT1A1P22309 533 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 UGT1A4P22310 534 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 NFKBIAP25963 317 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 UGT1A3P35503 534 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 UGT1A5P35504 534 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 SH3BP2P78314 561 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 CBX2Q14781 532 aaPredicted RBP16.81■□□□□ 0.28
SSR4-201ENST00000320857 E2F5Q15329 346 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 DHCR24Q15392 516 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 BRAT1Q6PJG6 821 aa16.81■□□□□ 0.28
SSR4-201ENST00000320857 MACC1Q6ZN28 852 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms