RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ZNF786Q8N393 782 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 FNDC5Q8NAU1 212 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 CYGBQ8WWM9 190 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 RMND5BQ96G75 393 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 CCM2LQ9NUG4 571 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 RNF186Q9NXI6 227 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 MYRFQ9Y2G1 1151 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 PCDHB7Q9Y5E2 793 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 GPR45Q9Y5Y3 372 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 CHEK2O96017 543 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 KLKB1P03952 638 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 PYGLP06737 847 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 PKMP14618 531 aaKnown RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 HOXB8P17481 243 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 LPOP22079 712 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 HK3P52790 923 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 ZNF177Q13360 481 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 OR2T11Q8NH01 316 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 PHF12Q96QT6 1004 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 OLAHQ9NV23 265 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 DUS2Q9NX74 493 aaKnown RBP17.27■□□□□ 0.36
COL9A1-201ENST00000320755 GSK3BP49841 420 aa17.27■□□□□ 0.35
COL9A1-201ENST00000320755 APOFQ13790 326 aa17.27■□□□□ 0.35
COL9A1-201ENST00000320755 TAF1AQ15573 450 aaPredicted RBP17.27■□□□□ 0.35
COL9A1-201ENST00000320755 RNF219Q5W0B1 726 aaPredicted RBP17.27■□□□□ 0.35
COL9A1-201ENST00000320755 RALGPS2Q86X27 583 aaPredicted RBP17.27■□□□□ 0.35
COL9A1-201ENST00000320755 CARM1Q86X55 608 aa17.27■□□□□ 0.35
COL9A1-201ENST00000320755 CMTR2Q8IYT2 770 aaKnown RBP17.27■□□□□ 0.35
COL9A1-201ENST00000320755 OR6K2Q8NGY2 324 aa17.27■□□□□ 0.35
COL9A1-201ENST00000320755 DDI1Q8WTU0 396 aa17.27■□□□□ 0.35
COL9A1-201ENST00000320755 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.27■□□□□ 0.35
COL9A1-201ENST00000320755 EPB41L1Q9H4G0 881 aa17.27■□□□□ 0.35
COL9A1-201ENST00000320755 OAZ3Q9UMX2 235 aa17.27■□□□□ 0.35
COL9A1-201ENST00000320755 ZFC3H1O60293 1989 aaKnown RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 CCDC154A6NI56 674 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 SYCE1LA8MT33 242 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 INPPL1O15357 1258 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 CA12O43570 354 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 SYNCRIPO60506 623 aaKnown RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 CTPS1P17812 591 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 FASP25445 335 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 IL2P60568 153 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 LIPEQ05469 1076 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 MRPL58Q14197 206 aaKnown RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 MINDY1Q8N5J2 469 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 ZNF599Q96NL3 588 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 KCTD14Q9BQ13 255 aaPredicted RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 SOX17Q9H6I2 414 aaPredicted RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 INTS7Q9NVH2 962 aaKnown RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 MARCH5Q9NX47 278 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 SLC22A3O75751 556 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 CORO1AP31146 461 aaKnown RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 ATP6V0D1P61421 351 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 FAM189BP81408 668 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 TXNL4AP83876 142 aaKnown RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 TNK2Q07912 1038 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 AAK1Q2M2I8 961 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 TRAF7Q6Q0C0 670 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 PEX13Q92968 403 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 WBP2Q969T9 261 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 TDRD1Q9BXT4 1180 aaKnown RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 ALG2Q9H553 416 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 POPDC3Q9HBV1 291 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 SMOXQ9NWM0 555 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 PCTPQ9UKL6 214 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 LRFN2Q9ULH4 789 aa17.26■□□□□ 0.35
COL9A1-201ENST00000320755 HEMK1Q9Y5R4 338 aaPredicted RBP17.26■□□□□ 0.35
COL9A1-201ENST00000320755 ANKRD66B4E2M5 251 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 GUCA1CO95843 209 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 NHSL2Q5HYW2 709 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 PPP4R4Q6NUP7 873 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 EPHX4Q8IUS5 362 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 CCDC97Q96F63 343 aaPredicted RBP17.25■□□□□ 0.35
COL9A1-201ENST00000320755 TRIM15Q9C019 465 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 RBM38Q9H0Z9 239 aaKnown RBP17.25■□□□□ 0.35
COL9A1-201ENST00000320755 PLK2Q9NYY3 685 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 PTTG2Q9NZH5 202 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 SUN2Q9UH99 717 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 ABT1Q9ULW3 272 aaKnown RBP17.25■□□□□ 0.35
COL9A1-201ENST00000320755 DMTF1Q9Y222 760 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 PCDHB9Q9Y5E1 797 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 A0A1W2PP18 115 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 ASPDHA6ND91 283 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 A8MX80 341 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 PRAMEF12O95522 483 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 ESRRBO95718 433 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 RPS17P08708 135 aaKnown RBP17.25■□□□□ 0.35
COL9A1-201ENST00000320755 BMP2P12643 396 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 BMP1P13497 986 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 OR1D2P34982 312 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 CTSL3PQ5NE16 218 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 GPRIN3Q6ZVF9 776 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 NKAPQ8N5F7 415 aaKnown RBP17.25■□□□□ 0.35
COL9A1-201ENST00000320755 TMEM161AQ9NX61 479 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 ABCD2Q9UBJ2 740 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 ZMYM5Q9UJ78 669 aa17.25■□□□□ 0.35
COL9A1-201ENST00000320755 COCHO43405 550 aa17.24■□□□□ 0.35
COL9A1-201ENST00000320755 KDELR3O43731 214 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms