RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 PTTG1O95997 202 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 CYP11A1P05108 521 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 UQCRC1P31930 480 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 LEPRP48357 1165 aaKnown RBP16.51■□□□□ 0.23
PACS1-201ENST00000320580 MXD1Q05195 221 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 ZSWIM7Q19AV6 140 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 HSF5Q4G112 596 aaPredicted RBP16.51■□□□□ 0.23
PACS1-201ENST00000320580 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 ATP6V0D2Q8N8Y2 350 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 OR5H6Q8NGV6 325 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 MAELQ96JY0 434 aaKnown RBP16.51■□□□□ 0.23
PACS1-201ENST00000320580 MKRN2Q9H000 416 aaKnown RBP16.51■□□□□ 0.23
PACS1-201ENST00000320580 IL37Q9NZH6 218 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 ENPP5Q9UJA9 477 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 MKLN1Q9UL63 735 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 HES2Q9Y543 173 aa16.51■□□□□ 0.23
PACS1-201ENST00000320580 TSPAN3O60637 253 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 SNX4O95219 450 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 IL7P13232 177 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 RRM2P31350 389 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 INAVAQ3KP66 663 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 SAMD7Q7Z3H4 446 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 NARS2Q96I59 477 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 TRIM54Q9BYV2 358 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 UBA2Q9UBT2 640 aaPredicted RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 A0A1B0GW55 424 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 C2CD4BA6NLJ0 364 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 HAT1O14929 419 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 GRID2O43424 1007 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 OR7A10O76100 309 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 DUX4L2P0CJ85 424 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 DUX4L3P0CJ86 424 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 DUX4L4P0CJ87 422 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 DUX4L5P0CJ88 424 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 DUX4L6P0CJ89 424 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 DUX4L7P0CJ90 424 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 C4BPBP20851 252 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 SLC10A2Q12908 348 aaPredicted RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 SELENBP1Q13228 472 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 TUBB3Q13509 450 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 EIF3MQ7L2H7 374 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 PYROXD2Q8N2H3 581 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 CENPIQ92674 756 aaPredicted RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 WDR83Q9BRX9 315 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 ARMC1Q9NVT9 282 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 PDP1Q9P0J1 537 aaPredicted RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 DUX4Q9UBX2 424 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 TRMT6Q9UJA5 497 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 CPSF3Q9UKF6 684 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 COL1A1P02452 1464 aaPredicted RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 ACOT8O14734 319 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 ITGB4P16144 1822 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 RAB25P57735 213 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 ZNF45Q02386 682 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 PGM5Q15124 567 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 IER5Q5VY09 327 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 ERICH5Q6P6B1 374 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 TTC29Q8NA56 475 aaPredicted RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 FAM45AQ8TCE6 357 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 SPPL2BQ8TCT7 592 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 AURKBQ96GD4 344 aaPredicted RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 PGLYRP2Q96PD5 576 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 SMAD5Q99717 465 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 MRPL45Q9BRJ2 306 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 APOL5Q9BWW9 433 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 WDCPQ9H6R7 721 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 FKBP14Q9NWM8 211 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 THG1LQ9NWX6 298 aaKnown RBP16.5■□□□□ 0.23
PACS1-201ENST00000320580 PKP3Q9Y446 797 aa16.5■□□□□ 0.23
PACS1-201ENST00000320580 PLD2O14939 933 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 STAG3L1P0CL83 205 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 PRKAR1AP10644 381 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 ATXN1P54253 815 aaKnown RBP16.49■□□□□ 0.23
PACS1-201ENST00000320580 BST2Q10589 180 aaKnown RBP16.49■□□□□ 0.23
PACS1-201ENST00000320580 HIST2H2ACQ16777 129 aaPredicted RBP16.49■□□□□ 0.23
PACS1-201ENST00000320580 DCBLD1Q8N8Z6 715 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 GPRASP2Q96D09 838 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 CCDC120Q96HB5 630 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 IL12RB2Q99665 862 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 NECTIN3Q9NQS3 549 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 ZNF624Q9P2J8 865 aaPredicted RBP16.49■□□□□ 0.23
PACS1-201ENST00000320580 TCRBV3S1A0A5B6 114 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 OLR1P78380 273 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 TSNQ15631 228 aaKnown RBP16.49■□□□□ 0.23
PACS1-201ENST00000320580 AGAP6Q5VW22 663 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 DET1Q7L5Y6 550 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 SVOPLQ8N434 492 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 OR56A4Q8NGH8 313 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 OR10A6Q8NH74 314 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 SNAPC3Q92966 411 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 AGAP4Q96P64 663 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 PEBP4Q96S96 227 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 SLC22A4Q9H015 551 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 ERVK13-1Q9NX77 482 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 TTC34A8MYJ7 566 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 SUPT20HL2P0C7V6 817 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 SPATC1Q76KD6 591 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 RASAL3Q86YV0 1011 aa16.49■□□□□ 0.23
PACS1-201ENST00000320580 PMEPA1Q969W9 287 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms