RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NCF1P14598 390 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 ADSLP30566 484 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 PPP1R3AQ16821 1122 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 LRRC66Q68CR7 880 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 PTRHD1Q6GMV3 140 aaKnown RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 GRAMD4Q6IC98 578 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 TPRG1Q6ZUI0 275 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 CLYBLQ8N0X4 340 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 CBARPQ8N350 705 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 CLDN19Q8N6F1 224 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 GPR26Q8NDV2 337 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 TRPC4APQ8TEL6 797 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 ASB2Q96Q27 587 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 CIPCQ9C0C6 399 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 DCLRE1BQ9H816 532 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 ZBTB26Q9HCK0 441 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 PRSS21Q9Y6M0 314 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 GOLGA8CPA6NN73 597 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 KLK8O60259 260 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 FGF4P08620 206 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 SPAM1P38567 509 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 HK3P52790 923 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 FAM109BQ6ICB4 259 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 CHSY3Q70JA7 882 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 NET1Q7Z628 596 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 DEFB107AQ8IZN7 70 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 RBFAQ8N0V3 343 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 RP9Q8TA86 221 aaKnown RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 ITFG1Q8TB96 612 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 LRRC3BQ96PB8 259 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 PANX3Q96QZ0 392 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 ZDHHC7Q9NXF8 308 aa18.19■□□□□ 0.5
CCDC43-201ENST00000315286 NOP53Q9NZM5 478 aaKnown RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 MRPS23Q9Y3D9 190 aaKnown RBP18.19■□□□□ 0.5
CCDC43-201ENST00000315286 AIM2O14862 343 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 LMNAP02545 664 aaKnown RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ITGB6P18564 788 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 LHCGRP22888 699 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 RPS3P23396 243 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ACRV1P26436 265 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 AGTR2P50052 363 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 FOXA1P55317 472 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 PTSQ03393 145 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 CLCQ05315 142 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 CYLC2Q14093 348 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 DMC1Q14565 340 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 WLSQ5T9L3 541 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 USP45Q70EL2 814 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 GPSM1Q86YR5 675 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 KIRREL3Q8IZU9 778 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ZNF557Q8N988 423 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 OR2A12Q8NGT7 310 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 SORCS1Q8WY21 1168 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ZNF641Q96N77 438 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 MCCC1Q96RQ3 725 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 TTC1Q99614 292 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 LBHD1Q9BQE6 289 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 MTIF3Q9H2K0 278 aaKnown RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 EBF2Q9HAK2 575 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 CRLS1Q9UJA2 301 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ZNF197O14709 1029 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 CIB2O75838 187 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 KRT36O76013 467 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 CA3P07451 260 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 EZRP15311 586 aaKnown RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 GEN1Q17RS7 908 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 LRRC73Q5JTD7 316 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ANKS6Q68DC2 871 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 RIPOR1Q6ZS17 1223 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 RFLNAQ6ZTI6 216 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 KIAA0907Q7Z7F0 614 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 LKAAEAR1Q8TD35 194 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 CYB5D2Q8WUJ1 264 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 C3orf30Q96M34 536 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 BRD9Q9H8M2 597 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 SEMA4BQ9NPR2 832 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 MARK1Q9P0L2 795 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 TSR3Q9UJK0 312 aaKnown RBP18.18■□□□□ 0.5
CCDC43-201ENST00000315286 ERVW-1Q9UQF0 538 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 DNAJC15Q9Y5T4 150 aa18.18■□□□□ 0.5
CCDC43-201ENST00000315286 A0A1B0GTL3 188 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 ATP6AP2A0A1C7CYW4 349 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 STX16-NPEPL1H3BU86 382 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 STX16O14662 325 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 ATP6AP2O75787 350 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 RPS17P08708 135 aaKnown RBP18.17■□□□□ 0.5
CCDC43-201ENST00000315286 TCF3P15923 654 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 GNAZP19086 355 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 POLR2EP19388 210 aaKnown RBP18.17■□□□□ 0.5
CCDC43-201ENST00000315286 WEE1P30291 646 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 GPR33Q49SQ1 333 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 PREPLQ4J6C6 727 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-201ENST00000315286 PGM2L1Q6PCE3 622 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 ADGRD2Q7Z7M1 963 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 C12orf76Q8N812 135 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-201ENST00000315286 OTUB2Q96DC9 234 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 PDLIM5Q96HC4 596 aaKnown RBP18.17■□□□□ 0.5
CCDC43-201ENST00000315286 KLHL32Q96NJ5 620 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 KCNA7Q96RP8 456 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms