RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 IDSP22304 550 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 HMGCLP35914 325 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 HALP42357 657 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 CLCNKAP51800 687 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 EPHA4P54764 986 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 XRCC4Q13426 336 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 ITGA9Q13797 1035 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 IHHQ14623 411 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 C16orf72Q14CZ0 275 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 PPP2R5EQ16537 467 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 C11orf63Q6NUN7 778 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 GLT6D1Q7Z4J2 308 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 SLC25A41Q8N5S1 370 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 IL22RA1Q8N6P7 574 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 TC2NQ8N9U0 490 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 SGF29Q96ES7 293 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 PPP1R2P1Q96PQ5 205 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 PLEKHG4BQ96PX9 1271 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 TEFMQ96QE5 360 aaKnown RBP12.54□□□□□ -0.4
CKS2-201ENST00000314355 FCRL5Q96RD9 977 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 TRIB3Q96RU7 358 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 WDR24Q96S15 920 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 BPIFA1Q9NP55 256 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 SAE1Q9UBE0 346 aaPredicted RBP12.54□□□□□ -0.4
CKS2-201ENST00000314355 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
CKS2-201ENST00000314355 CNOT6Q9ULM6 557 aaKnown RBP12.54□□□□□ -0.4
CKS2-201ENST00000314355 EPN1Q9Y6I3 576 aaPredicted RBP12.54□□□□□ -0.4
CKS2-201ENST00000314355 OAS3Q9Y6K5 1087 aaKnown RBP12.54□□□□□ -0.4
CKS2-201ENST00000314355 ARHGEF17Q96PE2 2063 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 DSPP15924 2871 aaKnown RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 ZFHX4Q86UP3 3567 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 LRP4O75096 1905 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 MACROD2A1Z1Q3 448 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 C2orf81A6NN90 581 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 EFCAB7A8K855 629 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 A8MU76 341 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 APOC4-APOC2K7ER74 178 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ANXA9O76027 345 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 APOC2P02655 101 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 THRAP10827 490 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 SFTPCP11686 197 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 CCL4P13236 92 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ZNF7P17097 686 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 XRCC1P18887 633 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 NFKB1P19838 968 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 MPSTP25325 297 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 SPAM1P38567 509 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 GEMP55040 296 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 WNT3AP56704 352 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 PRKD1Q15139 912 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 TGIF1Q15583 401 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 WDR74Q6RFH5 385 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 CRTC3Q6UUV7 619 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 CEACAM20Q6UY09 585 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ZNF574Q6ZN55 896 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 ZFAND4Q86XD8 727 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ZNF761Q86XN6 746 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 BLOC1S5Q8TDH9 187 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 CXorf40BQ96DE9 158 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 VPS35Q96QK1 796 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 PANX2Q96RD6 677 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ZPBPQ9BS86 351 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 EFHD1Q9BUP0 239 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 DDA1Q9BW61 102 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ARFGAP3Q9NP61 516 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 NFKBIL1Q9UBC1 381 aaPredicted RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 CPNE7Q9UBL6 633 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 TBC1D29Q9UFV1 150 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 DNAJC16Q9Y2G8 782 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 AAR2Q9Y312 384 aaKnown RBP12.53□□□□□ -0.4
CKS2-201ENST00000314355 ST14Q9Y5Y6 855 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ZZEF1O43149 2961 aa12.53□□□□□ -0.4
CKS2-201ENST00000314355 ATRXP46100 2492 aa12.52□□□□□ -0.4
CKS2-201ENST00000314355 hCG_1818297A0A087WSY0 165 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 LOC285095A0A1B0GVY8 99 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 CCDC66A2RUB6 948 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 B4E171 279 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
CKS2-201ENST00000314355 EFSO43281 561 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 TJP3O95049 919 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 PRB1P04280 392 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 FGF3P11487 239 aaPredicted RBP12.52□□□□□ -0.41
CKS2-201ENST00000314355 BPIP17213 487 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 ETV5P41161 510 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 TSPAN7P41732 249 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 RWDD2BP57060 319 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 PDE1BQ01064 536 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 TMEM115Q12893 351 aaPredicted RBP12.52□□□□□ -0.41
CKS2-201ENST00000314355 LDLRAP1Q5SW96 308 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 KIAA1614Q5VZ46 1190 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 CYB5D1Q6P9G0 228 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 TMPRSS9Q7Z410 1059 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 ADGRG6Q86SQ4 1221 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 TRAPPC5Q8IUR0 188 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms