RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CPA3P15088 417 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 GM2AP17900 193 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 COL9A1P20849 921 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 BGNP21810 368 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 SKIV2L2P42285 1042 aaKnown RBP22.33■■□□□ 1.16
IRF3-201ENST00000309877 CCINQ13939 588 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 HSF5Q4G112 596 aaPredicted RBP22.33■■□□□ 1.16
IRF3-201ENST00000309877 AGBL4Q5VU57 503 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 TMEM207Q6UWW9 146 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 RGS9BPQ6ZS82 235 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 ANKRD49Q8WVL7 239 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 UBXN10Q96LJ8 280 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 GPR78Q96P69 363 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 UNKQ9C0B0 810 aaKnown RBP22.33■■□□□ 1.16
IRF3-201ENST00000309877 SMOXQ9NWM0 555 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 MED16Q9Y2X0 877 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 SHISA7A6NL88 538 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 TSPAN6O43657 245 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 WISP3O95389 354 aaPredicted RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 SETMARQ53H47 684 aaPredicted RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 GPRC6AQ5T6X5 926 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 ZNF852Q6ZMS4 543 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 FSTL5Q8N475 847 aaPredicted RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 NUS1Q96E22 293 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 CCDC97Q96F63 343 aaPredicted RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 DCUN1D1Q96GG9 259 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 NSRP1Q9H0G5 558 aaKnown RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 SARS2Q9NP81 518 aaKnown RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 FBXL12Q9NXK8 326 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 CPSF2Q9P2I0 782 aaKnown RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 COPG2Q9UBF2 871 aa22.32■■□□□ 1.16
IRF3-201ENST00000309877 OAS3Q9Y6K5 1087 aaKnown RBP22.32■■□□□ 1.16
IRF3-201ENST00000309877 NDUFAB1O14561 156 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 PCDH8O95206 1070 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 FAM107AO95990 144 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 ZNF37AP17032 561 aaPredicted RBP22.31■■□□□ 1.16
IRF3-201ENST00000309877 ALDH3A1P30838 453 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 AKT1P31749 480 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 PAQR3Q6TCH7 311 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 ZNF765Q7L2R6 523 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 SPNS2Q8IVW8 549 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 CLDN19Q8N6F1 224 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 SIDT2Q8NBJ9 832 aaKnown RBP22.31■■□□□ 1.16
IRF3-201ENST00000309877 PPP1R14CQ8TAE6 165 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 RDH11Q8TC12 318 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 MRPL57Q9BQC6 102 aaKnown RBP22.31■■□□□ 1.16
IRF3-201ENST00000309877 PRDM6Q9NQX0 595 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 SIRPGQ9P1W8 387 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 TMPRSS11EQ9UL52 423 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 CA14Q9ULX7 337 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 PRSS21Q9Y6M0 314 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 CKAP5Q14008 2032 aa22.31■■□□□ 1.16
IRF3-201ENST00000309877 IQCF5A8MTL0 148 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 MYL2P10916 166 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 DRD4P21917 467 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 KCNA4P22459 653 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 PCLAFQ15004 111 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 ACAP2Q15057 778 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 MACC1Q6ZN28 852 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 ADHFE1Q8IWW8 467 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 NKAPQ8N5F7 415 aaKnown RBP22.3■■□□□ 1.16
IRF3-201ENST00000309877 MAFAQ8NHW3 353 aaPredicted RBP22.3■■□□□ 1.16
IRF3-201ENST00000309877 SREK1Q8WXA9 508 aaKnown RBP22.3■■□□□ 1.16
IRF3-201ENST00000309877 SLC6A17Q9H1V8 727 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 MRPL46Q9H2W6 279 aaKnown RBP22.3■■□□□ 1.16
IRF3-201ENST00000309877 GALPQ9UBC7 116 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 XPR1Q9UBH6 696 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 SERGEFQ9UGK8 458 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 SCML1Q9UN30 329 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 MTF2Q9Y483 593 aaPredicted RBP22.3■■□□□ 1.16
IRF3-201ENST00000309877 IGLV3-16A0A075B6K0 115 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 FADS2P1A8MWK0 482 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 CFAP99D6REC4 459 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 TRIM16O95361 564 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 RBP1P09455 135 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 RALBP11234 206 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 MSH3P20585 1137 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 TAS2R38P59533 333 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 CREB5Q02930 508 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 CHI3L2Q15782 390 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 ATG16L1Q676U5 607 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 FAM47EQ6ZV65 393 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 C10orf107Q8IVU9 208 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 BTN2A2Q8WVV5 523 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 SIPA1Q96FS4 1042 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 VPS35Q96QK1 796 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 FGFR1OP2Q9NVK5 253 aa22.3■■□□□ 1.16
IRF3-201ENST00000309877 F5P12259 2224 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 MYO10Q9HD67 2058 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 TK2O00142 265 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 SLC25A14O95258 325 aaPredicted RBP22.29■■□□□ 1.16
IRF3-201ENST00000309877 ITGB6P18564 788 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 ZBTB16Q05516 673 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 TTC31Q49AM3 519 aaPredicted RBP22.29■■□□□ 1.16
IRF3-201ENST00000309877 LDLRAP1Q5SW96 308 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 RAB3IL1Q8TBN0 382 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 CD200R1Q8TD46 325 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 NAT14Q8WUY8 206 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 PITPNM3Q9BZ71 974 aa22.29■■□□□ 1.16
IRF3-201ENST00000309877 MMP17Q9ULZ9 603 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms