RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BCLAF3A2AJT9 711 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 MAGEA13PA6NCF6 341 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 OR6C75A6NL08 312 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 C4orf47A7E2U8 309 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 FOXO6A8MYZ6 492 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 F8VP50 259 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PIRO00625 290 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 MCF2LO15068 1137 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 OGTO15294 1046 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 GYG2O15488 501 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 HCRTO43612 131 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CST8O60676 142 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 FKBP6O75344 327 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 LRCH4O75427 683 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TOM1L1O75674 476 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 IL18RAPO95256 599 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PSMG1O95456 288 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CAPNS1P04632 268 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 INHBAP08476 426 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SNRPAP09012 282 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 DLDP09622 509 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 LINGO3P0C6S8 592 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 NAT2P11245 290 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KRT3P12035 628 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KRT10P13645 584 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TYMPP19971 482 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 BCKDHBP21953 392 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PRKCHP24723 683 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ADRA1DP25100 572 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CNTFP26441 200 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 EPHB2P29323 1055 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 GJA4P35212 333 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 BCL6P41182 706 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ECI1P42126 302 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ALDH1A3P47895 512 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SERPINB9P50453 376 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SH3BGRP55822 239 aaPredicted RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ZXDBP98169 803 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 XIAPP98170 497 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 OTUD4Q01804 1114 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SLC25A11Q02978 314 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ZBTB16Q05516 673 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 AP1B1Q10567 949 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PLD1Q13393 1074 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 RUNX3Q13761 415 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 DPYSL3Q14195 570 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KCNJ11Q14654 390 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KPNB1Q14974 876 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 FASTKD3Q14CZ7 662 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PDK2Q15119 407 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 NOMO1Q15155 1222 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KCTD19Q17RG1 926 aaPredicted RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 MUM1Q2TAK8 710 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 NRN1LQ496H8 165 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 DNAL1Q4LDG9 190 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ATP13A4Q4VNC1 1196 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 MROH9Q5TGP6 573 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SDHAF4Q5VUM1 108 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 C9orf57Q5W0N0 161 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KAZNQ674X7 775 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TXNDC8Q6A555 127 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 JADE1Q6IE81 842 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 AAGABQ6PD74 315 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 UNQ6494/PRO21346Q6UXR6 183 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KYAT3Q6YP21 454 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TIFABQ6ZNK6 161 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ARCQ7LC44 396 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 NET1Q7Z628 596 aaPredicted RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 MTDHQ86UE4 582 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SLC26A11Q86WA9 606 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 MFN1Q8IWA4 741 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CMTM8Q8IZV2 173 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SYNPOQ8N3V7 929 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 FRMD1Q8N878 549 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 FBXO36Q8NEA4 188 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CCDC110Q8TBZ0 833 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ACMSDQ8TDX5 336 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TEKT4Q8WW24 435 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 STMN2Q93045 179 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 MCUR1Q96AQ8 359 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 E2F7Q96AV8 911 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TOE1Q96GM8 510 aaKnown RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 OXNAD1Q96HP4 312 aaPredicted RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TRAPPC9Q96Q05 1148 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TCHPQ9BT92 498 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TMEM121Q9BTD3 319 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 LGR4Q9BXB1 951 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 WWP1Q9H0M0 922 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ZCWPW1Q9H0M4 648 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 KCNK13Q9HB14 408 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CYP3A43Q9HB55 503 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 BARX1Q9HBU1 254 aaPredicted RBP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 CISHQ9NSE2 258 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.93□□□□□ -1.62
CKS1B-201ENST00000308987 ASNSD1Q9NWL6 643 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 TAS2R1Q9NYW7 299 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 SIRPGQ9P1W8 387 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PAK5Q9P286 719 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 PDP2Q9P2J9 529 aa4.93□□□□□ -1.62
CKS1B-201ENST00000308987 HEY2Q9UBP5 337 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms