RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 THAP6Q8TBB0 222 aa13.08□□□□□ -0.32
AFF1-201ENST00000307808 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.32
AFF1-201ENST00000307808 ALG2Q9H553 416 aa13.08□□□□□ -0.32
AFF1-201ENST00000307808 ARFGEF2Q9Y6D5 1785 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 TEX13CA0A0J9YWL9 993 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SCARF1Q14162 830 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 NDUFA9Q16795 377 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 XKR4Q5GH76 650 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 TAS1R2Q8TE23 839 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 TBC1D3BA6NDS4 549 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 CD247P20963 164 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 OR3A3P47888 321 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 OR3A2P47893 321 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SV2AQ7L0J3 742 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 ZNF709Q8N972 641 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 MARK4Q96L34 752 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 NSMCE3Q96MG7 304 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 NODALQ96S42 347 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 NDNQ99608 321 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 ENY2Q9NPA8 101 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 C14orf166Q9Y224 244 aaKnown RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 ARL5CA6NH57 179 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SPTLC1O15269 473 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 ENTPD5O75356 428 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 ITGA2BP08514 1039 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 TFEBP19484 476 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 PRDX6P30041 224 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 OGFRL1Q5TC84 451 aaPredicted RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 ZNF662Q6ZS27 426 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 NIPA1Q7RTP0 329 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 POP1Q99575 1024 aaKnown RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 ABCD2Q9UBJ2 740 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 HEATR5BQ9P2D3 2071 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 HCN1O60741 890 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SLC1A2P43004 574 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 GRIN3AQ8TCU5 1115 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 NAT14Q8WUY8 206 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 DNAJB3Q8WWF6 145 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 KAT2AQ92830 837 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 RHBDF1Q96CC6 855 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 PDP1Q9P0J1 537 aaPredicted RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 KCNK1O00180 336 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 ITGA10O75578 1167 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 ASLP04424 464 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 NUDT17P0C025 328 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 AP2S1P53680 142 aaPredicted RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 UTS2BQ765I0 119 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 PTGR2Q8N8N7 351 aaPredicted RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 ASAH2Q9NR71 780 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 TFR2Q9UP52 801 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SSTP61278 116 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SMARCB1Q12824 385 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SLC5A5Q92911 643 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 KCND1Q9NSA2 647 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 FAM237BA0A1B0GVD1 139 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 M0QX08 132 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 CLDN4O14493 209 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 CXCL8P10145 99 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 UROSP10746 265 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 ITPKBP27987 946 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SLC6A4P31645 630 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 CAPN13Q6MZZ7 669 aaPredicted RBP13.07□□□□□ -0.32
AFF1-201ENST00000307808 C11orf65Q8NCR3 313 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 SLC2A14Q8TDB8 520 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 WDR37Q9Y2I8 494 aa13.07□□□□□ -0.32
AFF1-201ENST00000307808 A0A0J9YYE9 177 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 H7C2Y5 167 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 SEPHS1P49903 392 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 AFF1P51825 1210 aaKnown RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 OAZ1P54368 228 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 C1orf216Q8TAB5 229 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 SIPA1Q96FS4 1042 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 CNDP2Q96KP4 475 aaKnown RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 MED31Q9Y3C7 131 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 DHX15O43143 795 aaKnown RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 IL12BP29460 328 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 IQSEC1Q6DN90 963 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 SERPINA13PQ6UXR4 307 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 DET1Q7L5Y6 550 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 CNTD1Q8N815 330 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 TBC1D16Q8TBP0 767 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 ACAT2Q9BWD1 397 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 TCF7L1Q9HCS4 588 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 TRAF6Q9Y4K3 522 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 YES1P07947 543 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 GLRA2P23416 452 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 S100PP25815 95 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 MAPK3P27361 379 aaPredicted RBP13.06□□□□□ -0.32
AFF1-201ENST00000307808 RGS19P49795 217 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 DNAJB8Q8NHS0 232 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 PHF24Q9UPV7 400 aa13.06□□□□□ -0.32
AFF1-201ENST00000307808 ACADVLP49748 655 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms