RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CELF3Q5SZQ8 465 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 CYP20A1Q6UW02 462 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SLC2A13Q96QE2 648 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 GPATCH1Q9BRR8 931 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 RMI1Q9H9A7 625 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 POLR1BQ9H9Y6 1135 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CYP4F11Q9HBI6 524 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 NPAP1Q9NZP6 1156 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 MARCH2Q9P0N8 246 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TCRBV9S1A1TA0A576 114 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ESYT3A0FGR9 886 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SH3PXD2BA1X283 911 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 WNT7AO00755 349 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 C1RP00736 705 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 PABPC4LP0CB38 370 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 HSD17B7P56937 341 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 BLMHQ13867 455 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 MPPE1Q53F39 396 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 MILR1Q7Z6M3 343 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZNF276Q8N554 614 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SLC7A13Q8TCU3 470 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SLC6A15Q9H2J7 730 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 PCIF1Q9H4Z3 704 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZBTB12Q9Y330 459 aaPredicted RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 IFT52Q9Y366 437 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 NRP2O60462 931 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SPATA31D3P0C874 917 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SPATA31D4Q6ZUB0 917 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 PNPLA2Q96AD5 504 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 KCTD12Q96CX2 325 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 CHFRQ96EP1 664 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 AXIN2Q9Y2T1 843 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TEX13CA0A0J9YWL9 993 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 E2F8A0AVK6 867 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ARHGEF33A8MVX0 844 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZSCAN9O15535 394 aaPredicted RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 KLHL18O94889 574 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CASP4P49662 377 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ANKDD1AQ495B1 522 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CDC42EP5Q6NZY7 148 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 C5orf46Q6UWT4 87 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 LRRN1Q6UXK5 716 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ANKRD36A6QL64 1941 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 DDX3XO00571 662 aaKnown RBP eCLIP3.99□□□□□ -1.77
USH2A-201ENST00000307340 PSIP1O75475 530 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 MNDAP41218 407 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 GRIA4P48058 902 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TBX4P57082 545 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CLDN10P78369 228 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 VWA5B1Q5TIE3 1220 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 DUS1LQ6P1R4 473 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 AKAP14Q86UN6 197 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 FEM1CQ96JP0 617 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CASS4Q9NQ75 786 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CASP8AP2Q9UKL3 1982 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ELOVL7A1L3X0 281 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 PRAF2O60831 178 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 COQ9O75208 318 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 RAP2AP10114 183 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CD9P21926 228 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 GSTT1P30711 240 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SLC6A4P31645 630 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 NOGQ13253 232 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CRHR2Q13324 411 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 NFIXQ14938 502 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TAF1AQ15573 450 aaPredicted RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 HLFQ16534 295 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 C10orf120Q5SQS8 335 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ENDOVQ8N8Q3 282 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 OR4L1Q8NH43 312 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 B4GALNT2Q8NHY0 566 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 PGAP3Q96FM1 320 aaPredicted RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 LIPT1Q9Y234 373 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZNF780BQ9Y6R6 833 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 RHOCP08134 193 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 KITP10721 976 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CLK2P49760 499 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 IKBKEQ14164 716 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 DUSP28Q4G0W2 176 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SLC22A15Q8IZD6 547 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 OR4C6Q8NH72 309 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 GANCQ8TET4 914 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TLCD1Q96CP7 247 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TAF1LQ8IZX4 1826 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 HSPB2A8KAH6 182 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ANTXR2P58335 489 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CACNG1Q06432 222 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ITGA7Q13683 1181 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 HSPB2Q16082 182 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 PTPROQ16827 1216 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.99□□□□□ -1.77
USH2A-201ENST00000307340 CERCAMQ5T4B2 595 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZYG11AQ6WRX3 759 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 GLT6D1Q7Z4J2 308 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 VPS35Q96QK1 796 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 RANBP9Q96S59 729 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CNTN6Q9UQ52 1028 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ATF5Q9Y2D1 282 aaPredicted RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 hCG_1818297A0A087WSY0 165 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 MCIDASD6RGH6 385 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms