RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 HEXDCQ8WVB3 486 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SCARF2Q96GP6 870 aaPredicted RBP10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TTC1Q99614 292 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TRIM51Q9BSJ1 452 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TUBB2BQ9BVA1 445 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CLPBQ9H078 707 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 UGT1A7Q9HAW7 530 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 UGT1A10Q9HAW8 530 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 UGT1A8Q9HAW9 530 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SYBUQ9NX95 663 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SIRPGQ9P1W8 387 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CDC23Q9UJX2 597 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 RIMKLBQ9ULI2 386 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GPR34Q9UPC5 381 aa10.88□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MROH6A6NGR9 719 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 EFCAB8A8MWE9 144 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 B4DGG1 531 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SMAPO00193 183 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TRIM38O00635 465 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GAPDHSO14556 408 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KMOO15229 486 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 YY2O15391 372 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MLNP12872 115 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ACP5P13686 325 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CKMT2P17540 419 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 VCLP18206 1134 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PPARGP37231 505 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ACTR1BP42025 376 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PTGIRP43119 386 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ACTR1AP61163 376 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CRADDP78560 199 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 XIAPP98170 497 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CACNG1Q06432 222 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TMEM115Q12893 351 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 BIRC2Q13490 618 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 NR0B2Q15466 257 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PLA2G4EQ3MJ16 856 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GPR33Q49SQ1 333 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CCDC157Q569K6 752 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF648Q5T619 568 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 RNASEH2BQ5TBB1 312 aaKnown RBP10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ARMC3Q5W041 872 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SLC30A9Q6PML9 568 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF534Q76KX8 674 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CHST15Q7LFX5 561 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TAS2R42Q7RTR8 314 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GLRX5Q86SX6 157 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OTUD6BQ8N6M0 293 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ARL10Q8N8L6 244 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 NAT8LQ8N9F0 302 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FAM181AQ8N9Y4 354 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FAM46DQ8NEK8 389 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OR6P1Q8NGX9 317 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GPBAR1Q8TDU6 330 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SNF8Q96H20 258 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CDKN2AIPNLQ96HQ2 116 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 APOLD1Q96LR9 279 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SERPINB12Q96P63 405 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 COPS8Q99627 209 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TRIM31Q9BZY9 425 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OSGEPL1Q9H4B0 414 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CAAP1Q9H8G2 361 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MRM3Q9HC36 420 aaKnown RBP10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GULP1Q9UBP9 304 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ANAPC5Q9UJX4 755 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF292O60281 2723 aa10.87□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PTPRBP23467 1997 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 DNAH14Q0VDD8 3507 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 RFPL3O75679 317 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GOT2P00505 430 aaKnown RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FTH1P19P0C7X4 201 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GIMD1P0DJR0 217 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SLC2A4P14672 509 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ACRV1P26436 265 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 AK4P27144 223 aaPredicted RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CTBSQ01459 385 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 DNAJC3Q13217 504 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PROX2Q3B8N5 592 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FASTKD1Q53R41 847 aaKnown RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 DNAJC21Q5F1R6 531 aaKnown RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 AARS2Q5JTZ9 985 aaKnown RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 LYPLAL1Q5VWZ2 237 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 DET1Q7L5Y6 550 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 NXPE1Q8N323 547 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 BBOF1Q8ND07 529 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MNS1Q8NEH6 495 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OR13J1Q8NGT2 312 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CCL4L1Q8NHW4 92 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZDHHC1Q8WTX9 485 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 NAT6Q93015 286 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 HDAC10Q969S8 669 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF514Q96K75 400 aaPredicted RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TIMM29Q9BSF4 260 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 BOCQ9BWV1 1114 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 RAB17Q9H0T7 212 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FAM96AQ9H5X1 160 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms