RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 GDAP2Q9NXN4 497 aa17.81■□□□□ 0.44
RETREG1-201ENST00000306320 CAB39Q9Y376 341 aaPredicted RBP17.81■□□□□ 0.44
RETREG1-201ENST00000306320 COMMD10Q9Y6G5 202 aa17.81■□□□□ 0.44
RETREG1-201ENST00000306320 USP3Q9Y6I4 520 aa17.81■□□□□ 0.44
RETREG1-201ENST00000306320 COL1A2P08123 1366 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 ZFC3H1O60293 1989 aaKnown RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 SHROOM3Q8TF72 1996 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 OR51F1A6NGY5 319 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 M0QZ92 97 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 SCAMP3O14828 347 aaKnown RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 TBC1D4O60343 1298 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 RASAL1O95294 804 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 KRT8P05787 483 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 TCF3P15923 654 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 SIM2Q14190 667 aaPredicted RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 ATP6AP1Q15904 470 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 SMUG1Q53HV7 270 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 TERB1Q8NA31 727 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 CENPIQ92674 756 aaPredicted RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 C11orf84Q9BUA3 381 aaPredicted RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 ITGB1BP2Q9UKP3 347 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 ERVK-11Q9UQG0 969 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 IPO13O94829 963 aaKnown RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 ACADSBP45954 432 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 NAB1Q13506 487 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 FAM110CQ1W6H9 321 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 TAF2Q6P1X5 1199 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 FRA10AC1Q70Z53 315 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 TMEM135Q86UB9 458 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 TMEM151AQ8N4L1 468 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 LRRC58Q96CX6 371 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 HSFY1Q96LI6 401 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 NPY6RQ99463 290 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 SLC30A3Q99726 388 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 C1QTNF1Q9BXJ1 281 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 INTS7Q9NVH2 962 aaKnown RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 PCDHGA8Q9Y5G5 932 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 PRRC2BQ5JSZ5 2229 aaKnown RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 RAD51BO15315 384 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 DBTP11182 482 aaKnown RBP17.8■□□□□ 0.44
RETREG1-201ENST00000306320 BMP4P12644 408 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 CPB1P15086 417 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 GPR15P49685 360 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 NEK2P51955 445 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 LRRTM3Q86VH5 581 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 CALML6Q8TD86 181 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 TBC1D14Q9P2M4 693 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 SLC30A1Q9Y6M5 507 aa17.8■□□□□ 0.44
RETREG1-201ENST00000306320 GSTA4O15217 222 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 FTH1P02794 183 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 KCNK10P57789 538 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 UGT3A1Q6NUS8 523 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 TAC4Q86UU9 113 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 SPARTQ8N0X7 666 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 ZNF555Q8NEP9 628 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 NSMCE2Q96MF7 247 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 OLFM1Q99784 485 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 BDH2Q9BUT1 245 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 COLEC11Q9BWP8 271 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 SLCO3A1Q9UIG8 710 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 GPSM3Q9Y4H4 160 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 H0YJX3 145 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 UBFD1O14562 309 aaKnown RBP17.79■□□□□ 0.44
RETREG1-201ENST00000306320 JRKO75564 520 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 THRBP10828 461 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 SLC6A2P23975 617 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
RETREG1-201ENST00000306320 MTHFRP42898 656 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 CLK1P49759 484 aaKnown RBP17.79■□□□□ 0.44
RETREG1-201ENST00000306320 DAOAP59103 153 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 SYT16Q17RD7 645 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 STRADAQ7RTN6 431 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 ALOXE3Q9BYJ1 711 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 GIMAP4Q9NUV9 329 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 ABI2Q9NYB9 513 aaPredicted RBP17.79■□□□□ 0.44
RETREG1-201ENST00000306320 PDE10AQ9Y233 779 aa17.79■□□□□ 0.44
RETREG1-201ENST00000306320 ACOX3O15254 700 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 MGEA5O60502 916 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 RFC2P35250 354 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 TMBIM6P55061 237 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 CDH17Q12864 832 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 EPS8Q12929 822 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 CATSPEREQ5SY80 951 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 THAP5Q7Z6K1 395 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 SCML4Q8N228 414 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 ANKRD49Q8WVL7 239 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 BIRC7Q96CA5 298 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 CITED4Q96RK1 184 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 RASSF1Q9NS23 344 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 KIAA1522Q9P206 1035 aaPredicted RBP17.78■□□□□ 0.44
RETREG1-201ENST00000306320 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.78■□□□□ 0.44
RETREG1-201ENST00000306320 NOD1Q9Y239 953 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 CCRL2O00421 344 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 UGT2B4P06133 528 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 GRIK1P39086 918 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.78■□□□□ 0.44
RETREG1-201ENST00000306320 INTS11Q5TA45 600 aaKnown RBP17.78■□□□□ 0.44
RETREG1-201ENST00000306320 AGMOQ6ZNB7 445 aa17.78■□□□□ 0.44
RETREG1-201ENST00000306320 MFSD2AQ8NA29 543 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms