RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CTU1Q7Z7A3 348 aaKnown RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 ITIH5Q86UX2 942 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 SPARTQ8N0X7 666 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 LRRC52Q8N7C0 313 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 OR10A6Q8NH74 314 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 HDAC2Q92769 488 aaKnown RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 MOV10Q9HCE1 1003 aaKnown RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 TAS2R13Q9NYV9 303 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 TRMT6Q9UJA5 497 aaKnown RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 DNAJC15Q9Y5T4 150 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 GABRB3P28472 473 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 SOX6P35712 828 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 INPP1P49441 399 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 CXCR3P49682 368 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 NPTX1Q15818 432 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 MAPKAPK3Q16644 382 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 DDR2Q16832 855 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 ZNF678Q5SXM1 525 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 DEPDC1Q5TB30 811 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 AHSA2Q719I0 299 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 SPATA19Q7Z5L4 167 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 DSG4Q86SJ6 1040 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 FAR1Q8WVX9 515 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 STON2Q8WXE9 905 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 NSUN5Q96P11 429 aaKnown RBP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 SLC30A3Q99726 388 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 NANOGQ9H9S0 305 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 INTS7Q9NVH2 962 aaKnown RBP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 TFECO14948 347 aaPredicted RBP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 KPNA6O60684 536 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 SULT1C4O75897 302 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 LCP2Q13094 533 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 UGT3A1Q6NUS8 523 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 TBATAQ96M53 351 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 DMRTB1Q96MA1 342 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 COQ7Q99807 217 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 SPON2Q9BUD6 331 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 SIAEQ9HAT2 523 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 CITO14578 2027 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 ILVBLA1L0T0 632 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 TBKBP1A7MCY6 615 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 PAX3P23760 479 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 GRM5P41594 1212 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 OR4D2P58180 307 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 MCCD1P59942 119 aaPredicted RBP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 CYP4F2P78329 520 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 CYP4F3Q08477 520 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 NPWQ8N729 165 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 ISL2Q96A47 359 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 GAD1Q99259 594 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 NXF3Q9H4D5 531 aaKnown RBP12.94□□□□□ -0.34
TRIM35-201ENST00000305364 EHD3Q9NZN3 535 aa12.94□□□□□ -0.34
TRIM35-201ENST00000305364 LOC100130705A0A1B0GUX0 176 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 RGS10O43665 173 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 GABBR2O75899 941 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 CDK14O94921 469 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ALDOCP09972 364 aaKnown RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 AGXTP21549 392 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 IGFBP5P24593 272 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 SHMT2P34897 504 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 RENBPP51606 427 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ZNF789Q5FWF6 425 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ATAD3BQ5T9A4 648 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 PELI3Q8N2H9 469 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 EFHBQ8N7U6 833 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 CNIH3Q8TBE1 160 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 SPATA17Q96L03 361 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 KLHL5Q96PQ7 755 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 KAT8Q9H7Z6 458 aaKnown RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 MPP6Q9NZW5 540 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 DNAJB9Q9UBS3 223 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 PNMA8CA0A1B0GUJ8 204 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 EFCAB9A8MZ26 197 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 DCLK1O15075 740 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 MYL3P08590 195 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ENO2P09104 434 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 CD36P16671 472 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 GPX3P22352 226 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 MAP2K4P45985 399 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 SH3BP2P78314 561 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 GHRHRQ02643 423 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ZFP69Q49AA0 526 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 SULT1C3Q6IMI6 304 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 LARP4Q71RC2 724 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 CYP2U1Q7Z449 544 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 HID1Q8IV36 788 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 Q8N9G6 341 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 CENPIQ92674 756 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 NPY6RQ99463 290 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 APOL5Q9BWW9 433 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 MROQ9BYG7 248 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 RMND5AQ9H871 391 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ZFP14Q9HCL3 533 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 NDFIP2Q9NV92 336 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms