RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 TRIM39Q9HCM9 518 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 FBXO6Q9NRD1 293 aaPredicted RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 ZNF446Q9NWS9 450 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 ZDHHC3Q9NYG2 299 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 ATXN10Q9UBB4 475 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 GALPQ9UBC7 116 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 KLF15Q9UIH9 416 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 SLC17A4Q9Y2C5 497 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 TMEM98Q9Y2Y6 226 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 A0A087WUV0 522 aaPredicted RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 FPGTO14772 594 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 CHUKO15111 745 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 TCEA3O75764 348 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 SLC25A14O95258 325 aaPredicted RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 MYCLP1P12525 358 aaPredicted RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 ITGALP20701 1170 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 STX2P32856 288 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 ABCG1P45844 678 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 CSRP3P50461 194 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 PGGT1BP53609 377 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 ADARP55265 1226 aaKnown RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 YPEL5P62699 121 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 RACK1P63244 317 aaKnown RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 TMEM115Q12893 351 aaPredicted RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 FZD2Q14332 565 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 CTSL3PQ5NE16 218 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 MRNIPQ6NTE8 343 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 PACS1Q6VY07 963 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 CERS6Q6ZMG9 384 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 KIAA0408Q6ZU52 694 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 TAS2R42Q7RTR8 314 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 C11orf74Q86VG3 221 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 SLC26A11Q86WA9 606 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 ZC3HC1Q86WB0 502 aaKnown RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 LMNTD2Q8IXW0 634 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 MFSD2AQ8NA29 543 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 SUMF1Q8NBK3 374 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
RFX3-201ENST00000302303 CYTH2Q99418 400 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 FAM167BQ9BTA0 163 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 C1QTNF7Q9BXJ2 289 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 FGF22Q9HCT0 170 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 CRYL1Q9Y2S2 319 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 SDK1Q7Z5N4 2213 aa9.38□□□□□ -0.91
RFX3-201ENST00000302303 ATXN2Q99700 1313 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 SPTY2D1-AS1A0A0U1RR47 76 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 AGPSO00116 658 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 PYGLP06737 847 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 ZNF8P17098 575 aaPredicted RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 CD38P28907 300 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 PHBP35232 272 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 DHPSP49366 369 aaPredicted RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 CSNK1EP49674 416 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 KIAA1024LP59773 190 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 EIF2B5Q13144 721 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 THOC5Q13769 683 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 SIM2Q14190 667 aaPredicted RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 ITIH4Q14624 930 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 STAT4Q14765 748 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 NFATC4Q14934 902 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 MAP9Q49MG5 647 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 LDLRAP1Q5SW96 308 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 RBM20Q5T481 1227 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 LYSMD4Q5XG99 296 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 STRA8Q7Z7C7 330 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 LRRC6Q86X45 466 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 PPM1NQ8N819 430 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 LKAAEAR1Q8TD35 194 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 CALML6Q8TD86 181 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 MZB1Q8WU39 189 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 OR1E3Q8WZA6 343 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 SNX19Q92543 992 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 ULK4Q96C45 1275 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 SGF29Q96ES7 293 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 COPS8Q99627 209 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 TMEM109Q9BVC6 243 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 WDR26Q9H7D7 661 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 MRPL40Q9NQ50 206 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 PPANQ9NQ55 473 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 INTS10Q9NVR2 710 aaKnown RBP9.37□□□□□ -0.91
RFX3-201ENST00000302303 ZFATQ9P243 1243 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 SLC23A2Q9UGH3 650 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 FETUBQ9UGM5 382 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 CRLS1Q9UJA2 301 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 CACNA1HO95180 2353 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 WDR87Q6ZQQ6 2873 aa9.37□□□□□ -0.91
RFX3-201ENST00000302303 A6NNZ2 444 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 IQCF5A8MTL0 148 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 MEI4A8MW99 385 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 TLR4O00206 839 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 TOR1BO14657 336 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 VILLO15195 856 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 BCAT2O15382 392 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 NUAK1O60285 661 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 SASH3O75995 380 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 RHOBTB1O94844 696 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 WISP3O95389 354 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms