RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 MYOCQ99972 504 aa13.4□□□□□ -0.27
SKA3-201ENST00000298260 EML4Q9HC35 981 aaKnown RBP13.4□□□□□ -0.27
SKA3-201ENST00000298260 MYOZ2Q9NPC6 264 aa13.4□□□□□ -0.27
SKA3-201ENST00000298260 PIGVQ9NUD9 493 aa13.4□□□□□ -0.27
SKA3-201ENST00000298260 QPCTLQ9NXS2 382 aa13.4□□□□□ -0.27
SKA3-201ENST00000298260 LINC00854A0A1B0GVQ3 168 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 ZSCAN5BA6NJL1 495 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 UPK1BO75841 260 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 PRSS23O95084 383 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 IL5RAQ01344 420 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
SKA3-201ENST00000298260 P2RY8Q86VZ1 359 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 MINDY2Q8NBR6 621 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 MCFD2Q8NI22 146 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 CITED4Q96RK1 184 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 HBEGFQ99075 208 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 MRIQ9BWK5 157 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 FBXO8Q9NRD0 319 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 MAGEB16A2A368 324 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 C16orf96A6NNT2 1141 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 G3V2T6 193 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 RGS13O14921 159 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 KRT8P05787 483 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 GSNP06396 782 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 C7P10643 843 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 MASP1P48740 699 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 EFNA5P52803 228 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 PPP5CP53041 499 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 SIM2Q14190 667 aaPredicted RBP13.39□□□□□ -0.27
SKA3-201ENST00000298260 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
SKA3-201ENST00000298260 UNC50Q53HI1 259 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 RBM48Q5RL73 367 aaKnown RBP13.39□□□□□ -0.27
SKA3-201ENST00000298260 BNIPLQ7Z465 357 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 AFAP1L2Q8N4X5 818 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 BPIFB1Q8TDL5 484 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 RORBQ92753 470 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 UBE2FQ969M7 185 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 PYCR2Q96C36 320 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 REXO4Q9GZR2 422 aaKnown RBP13.39□□□□□ -0.27
SKA3-201ENST00000298260 C14orf119Q9NWQ9 140 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
SKA3-201ENST00000298260 MEN1O00255 615 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 ICMTO60725 284 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 PMPCBO75439 489 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 MAFO75444 373 aaPredicted RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 DDNO94850 711 aaPredicted RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 CDK14O94921 469 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 CD4P01730 458 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 LCKP06239 509 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 DBTP11182 482 aaKnown RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 ARPP19P56211 112 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 RAPSNQ13702 412 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 ATAD3CQ5T2N8 411 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 GDPD3Q7L5L3 318 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 TMEM246Q9BRR3 403 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 BEX2Q9BXY8 128 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 SLC52A3Q9NQ40 469 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 FBXO5Q9UKT4 447 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 PRELID1Q9Y255 219 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 EVPLQ92817 2033 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 OR51F1A6NGY5 319 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 TBC1D4O60343 1298 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 DAB1O75553 588 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 UBA1P22314 1058 aaKnown RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 ISL1P61371 349 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 INCA1Q0VD86 236 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 CDH17Q12864 832 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 PSMD5Q16401 504 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 WDR45BQ5MNZ6 344 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 IRAK1BP1Q5VVH5 260 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 SULT1C3Q6IMI6 304 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 FKBP9P1Q75LS8 142 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 RIMKLAQ8IXN7 391 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 METTL4Q8N3J2 472 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 CADM2Q8N3J6 435 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 ESAMQ96AP7 390 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 PTERQ96BW5 349 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 POLG2Q9UHN1 485 aa13.38□□□□□ -0.27
SKA3-201ENST00000298260 INTS6Q9UL03 887 aaKnown RBP13.38□□□□□ -0.27
SKA3-201ENST00000298260 PRMT5O14744 637 aaPredicted RBP13.37□□□□□ -0.27
SKA3-201ENST00000298260 DCLK1O15075 740 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 DNAJB13P59910 316 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 ADIGQ0VDE8 80 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 TMEM132DQ14C87 1099 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 PCSK7Q16549 785 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 PFKFB4Q16877 469 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 AASDHQ4L235 1098 aaPredicted RBP13.37□□□□□ -0.27
SKA3-201ENST00000298260 ZNF678Q5SXM1 525 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 NAPEPLDQ6IQ20 393 aa13.37□□□□□ -0.27
SKA3-201ENST00000298260 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms