RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ZBTB18Q99592 522 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 VPS45Q9NRW7 570 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 DUS2Q9NX74 493 aaKnown RBP13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 SQORQ9Y6N5 450 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 TRIM43BA6NCK2 446 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 DEAF1O75398 565 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 C1RP00736 705 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 CAPN1P07384 714 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 AP5B1Q2VPB7 878 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 TBPL2Q6SJ96 375 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 CARM1Q86X55 608 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 GPSM1Q86YR5 675 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 EPHX4Q8IUS5 362 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 MICU2Q8IYU8 434 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 TFAP2CQ92754 450 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 TMBIM1Q969X1 311 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 WDR70Q9NW82 654 aa13.21□□□□□ -0.29
TNFRSF21-201ENST00000296861 A0A0D9SEW6 157 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 PABPN1LA6NDY0 278 aaKnown RBP13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 H3BMQ9 156 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 ECI2O75521 394 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 CAPGP40121 348 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 MAGEA12P43365 314 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 RXRGP48443 463 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 PTGR1Q14914 329 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 CPSF6Q16630 551 aaKnown RBP eCLIP13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 AASDHQ4L235 1098 aaPredicted RBP13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 UBXN11Q5T124 520 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 CRTC3Q6UUV7 619 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 HEATR4Q86WZ0 1026 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 TRPV3Q8NET8 790 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 GLT1D1Q96MS3 346 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 COG8Q96MW5 612 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 INVSQ9Y283 1065 aa13.21□□□□□ -0.3
TNFRSF21-201ENST00000296861 ESRRBO95718 433 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 STAU1O95793 577 aaKnown RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 AQP1P29972 269 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 HTR6P50406 440 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ARHGEF7Q14155 803 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 TGFBIQ15582 683 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 FAM45BPQ6NSW5 357 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 RANBP10Q6VN20 620 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 BBS5Q8N3I7 341 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 SFRP1Q8N474 314 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 FAM45AQ8TCE6 357 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 HTRA1Q92743 480 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 GPR63Q9BZJ6 419 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 SLC25A51Q9H1U9 297 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 RPF2Q9H7B2 306 aaKnown RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 MEAF6Q9HAF1 191 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 HPS4Q9NQG7 708 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 MARCH2Q9P0N8 246 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 A8MU76 341 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CBFA2T3O75081 653 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 SEC22BO75396 215 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 S1PR4O95977 384 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ABCB1P08183 1280 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 HSPA7P48741 367 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 DGKEP52429 567 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CYP4F2P78329 520 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CYP4F3Q08477 520 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CD300CQ08708 224 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 PRKG2Q13237 762 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 FAM98BQ52LJ0 330 aaKnown RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 NHSL2Q5HYW2 709 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 NANOGP8Q6NSW7 305 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 PPP4R4Q6NUP7 873 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 GPR180Q86V85 440 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CENPSQ8N2Z9 138 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 SLC15A4Q8N697 577 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CLDN19Q8N6F1 224 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CINPQ9BW66 212 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 NANOGQ9H9S0 305 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 CCM2LQ9NUG4 571 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ADGRE2Q9UHX3 823 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ZNF487B1APH4 448 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 NBNO60934 754 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 PAX3P23760 479 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 FMO3P31513 532 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 MAGEA8P43361 318 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 LARP4Q71RC2 724 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 R3HCC1LQ7Z5L2 792 aaKnown RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ITIH5Q86UX2 942 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 C8orf59Q8N0T1 100 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 OR13J1Q8NGT2 312 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 EEF1AKMT1Q8WVE0 214 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 BORCS5Q969J3 196 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 TMEM181Q9P2C4 612 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms