RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RORCP51449 518 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 ECHDC2Q86YB7 292 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 TIGD4Q8IY51 512 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 SLC43A3Q8NBI5 491 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 MFSD14AQ96MC6 490 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 TAAR1Q96RJ0 339 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 NDNQ99608 321 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
NIPBL-201ENST00000282516 IL1BP01584 269 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF3P17036 446 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 GALK1P51570 392 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 MLLT6P55198 1093 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-201ENST00000282516 ERVK-9P63128 1117 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 LRRC38Q5VT99 294 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 ALG1LQ6GMV1 187 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 USP30Q70CQ3 517 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 SATL1Q86VE3 508 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 ALLCQ8N6M5 410 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 PMM1Q92871 262 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 TOP1MTQ969P6 601 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 FARSBQ9NSD9 589 aaKnown RBP8.68□□□□□ -1.02
NIPBL-201ENST00000282516 WASF3Q9UPY6 502 aa8.68□□□□□ -1.02
NIPBL-201ENST00000282516 A8MX80 341 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ISM1B1AKI9 464 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZBTB11O95625 1053 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ITGA2BP08514 1039 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 RARAP10276 462 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ABL2P42684 1182 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 POLR2JP52435 117 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF143P52747 638 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 AARSD1Q9BTE6 412 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PCYOX1Q9UHG3 505 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TULP4Q9NRJ4 1543 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 NR2C1P13056 603 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 EIF4BP23588 611 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 KDELR1P24390 212 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ACSL1P33121 698 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CHKAP35790 457 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ACVR2BQ13705 512 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 NFIXQ14938 502 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PPP1R15BQ5SWA1 713 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF627Q7L945 461 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SSX6Q7RTT6 188 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 C4orf19Q8IY42 314 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 GHDCQ8N2G8 530 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PQLC1Q8N2U9 271 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 OR4C6Q8NH72 309 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TRPM4Q8TD43 1214 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PRMT6Q96LA8 375 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 MIR1-1HGQ9H1L0 117 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 NPEPPSL1A6NEC2 478 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 RPLP0P05388 317 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 EPCAMP16422 314 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SLC6A9P48067 706 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FAM83AQ86UY5 434 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 MPP5Q8N3R9 675 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CPSF7Q8N684 471 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 KAT2AQ92830 837 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 RIOK2Q9BVS4 552 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TCF7L1Q9HCS4 588 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF180Q9UJW8 692 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 RAB21Q9UL25 225 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 COLEC10Q9Y6Z7 277 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZSCAN5BA6NJL1 495 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TRAFD1O14545 582 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SLC25A14O95258 325 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SSTP61278 116 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 UBE2R2Q712K3 238 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 OR8D1Q8WZ84 308 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 C16orf58Q96GQ5 468 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SEMA6BQ9H3T3 888 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FRMPD1Q5SYB0 1578 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CLDN4O14493 209 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 MAFKO60675 156 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF823P16415 610 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ERP29P30040 261 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 HSD17B2P37059 387 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FOXO4P98177 505 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TBX2Q13207 712 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 KLHL22Q53GT1 634 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 XKR4Q5GH76 650 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZYG11BQ9C0D3 744 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 DEFB129Q9H1M3 183 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PRELID1Q9Y255 219 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 NCANO14594 1321 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TRIM64BA6NI03 449 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SIGLEC16A6NMB1 481 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TP73O15350 636 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 NRP2O60462 931 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 C22orf31O95567 290 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FGF19O95750 216 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 RIPPLY1Q0D2K3 151 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 LAPTM5Q13571 262 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FOXR1Q6PIV2 292 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PRR23CQ6ZRP0 262 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 DEFB106AQ8N104 65 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF709Q8N972 641 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 HCAR2Q8TDS4 363 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ERLEC1Q96DZ1 483 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FERD3LQ96RJ6 166 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms