RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 POLE4Q9NR33 117 aa11.28□□□□□ -0.6
SCLT1-201ENST00000281142 OR12D3Q9UGF7 316 aa11.28□□□□□ -0.6
SCLT1-201ENST00000281142 WARS2Q9UGM6 360 aaKnown RBP11.28□□□□□ -0.6
SCLT1-201ENST00000281142 PSME2Q9UL46 239 aa11.28□□□□□ -0.6
SCLT1-201ENST00000281142 SLC30A1Q9Y6M5 507 aa11.28□□□□□ -0.6
SCLT1-201ENST00000281142 M0QZ92 97 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 JRKO75564 520 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 HTR1AP08908 422 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 ALDH4A1P30038 563 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 MBTPS1Q14703 1052 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 SF3B4Q15427 424 aaKnown RBP eCLIP11.27□□□□□ -0.65e-6■■■■□ 26.7
SCLT1-201ENST00000281142 FAM26DQ5JW98 314 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 CLEC20AQ6ZU45 233 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 PHYKPLQ8IUZ5 450 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 RAVER1Q8IY67 606 aaKnown RBP11.27□□□□□ -0.6
SCLT1-201ENST00000281142 HS3ST5Q8IZT8 346 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 MINDY1Q8N5J2 469 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 PDZD8Q8NEN9 1154 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 SH3YL1Q96HL8 342 aaPredicted RBP11.27□□□□□ -0.6
SCLT1-201ENST00000281142 C1orf50Q9BV19 199 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 DUSP16Q9BY84 665 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 TKTL2Q9H0I9 626 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 RAD21L1Q9H4I0 556 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 ALG2Q9H553 416 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 MID1IP1Q9NPA3 183 aa11.27□□□□□ -0.6
SCLT1-201ENST00000281142 INTS7Q9NVH2 962 aaKnown RBP11.27□□□□□ -0.6
SCLT1-201ENST00000281142 SCHIP1Q9P0W5 487 aaPredicted RBP11.27□□□□□ -0.6
SCLT1-201ENST00000281142 MIA3Q5JRA6 1907 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 BCAS1O75363 584 aaPredicted RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 RECQL4O94761 1208 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 CDK14O94921 469 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 ALBP02768 609 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 HGFP14210 728 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 HOXA11P31270 313 aaPredicted RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 TMBIM6P55061 237 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 POU4F1Q01851 419 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 FPGSQ05932 587 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 DMPKQ09013 629 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 NFYCQ13952 458 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 OXA1LQ15070 435 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 AGAP9Q5VTM2 703 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 MIER2Q8N344 545 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 PDPRQ8NCN5 879 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 TWIST2Q8WVJ9 160 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 TUBGCP3Q96CW5 907 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 HOPXQ9BPY8 73 aaPredicted RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 KCTD14Q9BQ13 255 aaPredicted RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 MED10Q9BTT4 135 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 FUNDC2Q9BWH2 189 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 CHID1Q9BWS9 393 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 SIK2Q9H0K1 926 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 ING2Q9H160 280 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 NTN4Q9HB63 628 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 TREX1Q9NSU2 369 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 TMEM9Q9P0T7 183 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 ANAPC2Q9UJX6 822 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 FBXW11Q9UKB1 542 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 OAS3Q9Y6K5 1087 aaKnown RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 LDLRP01130 860 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 RPLP2P05387 115 aaKnown RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 NPR3P17342 541 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 IMPDH1P20839 514 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 AGXTP21549 392 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 HRH2P25021 359 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 HTR1BP28222 390 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 OR4D2P58180 307 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 BNIP2Q12982 314 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 CARTPTQ16568 116 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 DPY19L1Q2PZI1 675 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 HECTD2Q5U5R9 776 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 C14orf80Q86SX3 495 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 ISCA2Q86U28 154 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 RALGPS2Q86X27 583 aaPredicted RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 KIAA2013Q8IYS2 634 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 BEST2Q8NFU1 509 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 ZFP90Q8TF47 636 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 BIRC7Q96CA5 298 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 TDRD1Q9BXT4 1180 aaKnown RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 CCDC68Q9H2F9 335 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 EHD1Q9H4M9 534 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 AGO3Q9H9G7 860 aaKnown RBP11.27□□□□□ -0.61
SCLT1-201ENST00000281142 SLC52A3Q9NQ40 469 aa11.27□□□□□ -0.61
SCLT1-201ENST00000281142 PFDN6O15212 129 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 EEF1DP29692 281 aaKnown RBP11.26□□□□□ -0.61
SCLT1-201ENST00000281142 LSM3P62310 102 aaKnown RBP11.26□□□□□ -0.61
SCLT1-201ENST00000281142 PLIN5Q00G26 463 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 MEP1AQ16819 746 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 SLC16A12Q6ZSM3 486 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 SPARTQ8N0X7 666 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 PTGR2Q8N8N7 351 aaPredicted RBP11.26□□□□□ -0.61
SCLT1-201ENST00000281142 TERB1Q8NA31 727 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 FKBP10Q96AY3 582 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 ALOXE3Q9BYJ1 711 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 POLG2Q9UHN1 485 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 POU2F3Q9UKI9 436 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms