RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 TPM1P09493 284 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 PRKAR1AP10644 381 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 ITGB6P18564 788 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 POLE2P56282 527 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 DCDC1P59894 354 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 MC2RQ01718 297 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 TRIM14Q14142 442 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 PDK1Q15118 436 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 SLC9A4Q6AI14 798 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 ARHGAP22Q7Z5H3 698 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 LRRTM4Q86VH4 590 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 TRAM1L1Q8N609 369 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 CNTD1Q8N815 330 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 BMPERQ8N8U9 685 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 GPR26Q8NDV2 337 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 GLYATL1Q969I3 302 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 SLC25A18Q9H1K4 315 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 EPB41L1Q9H4G0 881 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 APMAPQ9HDC9 416 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 RAD18Q9NS91 495 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 DNAJC16Q9Y2G8 782 aa12.6□□□□□ -0.39
CD44-203ENST00000278386 MN1Q10571 1320 aaPredicted RBP12.6□□□□□ -0.39
CD44-203ENST00000278386 A0A0A6YYK5 440 aaPredicted RBP12.59□□□□□ -0.39
CD44-203ENST00000278386 ZNF487B1APH4 448 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 CBFA2T2O43439 604 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 MTX2O75431 263 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 STK17BO94768 372 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 VIPP01282 170 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 ZFXP17010 805 aaPredicted RBP12.59□□□□□ -0.39
CD44-203ENST00000278386 HNRNPH3P31942 346 aaKnown RBP12.59□□□□□ -0.39
CD44-203ENST00000278386 CSRP3P50461 194 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 GFERP55789 205 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 UBE2IP63279 158 aaKnown RBP12.59□□□□□ -0.39
CD44-203ENST00000278386 CDK18Q07002 472 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 FOXM1Q08050 763 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 KCNAB2Q13303 367 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 PDPK2PQ6A1A2 396 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 CCDC70Q6NSX1 233 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 ADGRG6Q86SQ4 1221 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 PLXDC1Q8IUK5 500 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 SLC35G2Q8TBE7 412 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 EID2BQ96D98 161 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 RNF31Q96EP0 1072 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 IMP4Q96G21 291 aaKnown RBP12.59□□□□□ -0.39
CD44-203ENST00000278386 CATSPER2Q96P56 530 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 TRIB3Q96RU7 358 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 EFHD1Q9BUP0 239 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 SLC25A51Q9H1U9 297 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 ADNPQ9H2P0 1102 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 TRIM39Q9HCM9 518 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 SPTLC3Q9NUV7 552 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 GEMIN8Q9NWZ8 242 aaKnown RBP12.59□□□□□ -0.39
CD44-203ENST00000278386 PILRAQ9UKJ1 303 aa12.59□□□□□ -0.39
CD44-203ENST00000278386 TLN1Q9Y490 2541 aaKnown RBP12.59□□□□□ -0.39
CD44-203ENST00000278386 LOC101059948A0A1B0GTJ6 334 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 SSU72P8A0A1W2PR75 194 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 GPR89AB7ZAQ6 455 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 TERTO14746 1132 aaKnown RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 POLR1CO15160 346 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 KMOO15229 486 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 CAPN5O15484 640 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 MT-CYBP00156 380 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 GPR89BP0CG08 455 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 BPIP17213 487 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 TYRP1P17643 537 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 AMD1P17707 334 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 MAP4P27816 1152 aaKnown RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 TNNT3P45378 269 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 CCR10P46092 362 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 CDC20Q12834 499 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 GTF2H3Q13889 308 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 ASTE1Q2TB18 679 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 VSIG1Q86XK7 387 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 PTRH1Q86Y79 214 aaKnown RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 RHOT2Q8IXI1 618 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 UNC5BQ8IZJ1 945 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 OR8K1Q8NGG5 319 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 GDAP1Q8TB36 358 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 SLC45A3Q96JT2 553 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 OLFM3Q96PB7 478 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 TGM7Q96PF1 710 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 PLEKHG4BQ96PX9 1271 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 TIMM29Q9BSF4 260 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 MAGEE1Q9HCI5 957 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 BPIFA1Q9NP55 256 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 FBXO8Q9NRD0 319 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 ABHD10Q9NUJ1 306 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 UBP1Q9NZI7 540 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 SCHIP1Q9P0W5 487 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 NFKBIL1Q9UBC1 381 aaPredicted RBP12.58□□□□□ -0.4
CD44-203ENST00000278386 IL17BQ9UHF5 180 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 ADGRG1Q9Y653 693 aa12.58□□□□□ -0.4
CD44-203ENST00000278386 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
CD44-203ENST00000278386 F5H423 210 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms