RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 PTPRCAPQ14761 206 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 ATP13A5Q4VNC0 1218 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 PDPK2PQ6A1A2 396 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 DARS2Q6PI48 645 aaKnown RBP14.26□□□□□ -0.13
HMGN3-201ENST00000275036 SYCE1Q8N0S2 351 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 BLOC1S5Q8TDH9 187 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 SLC37A2Q8TED4 501 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 PLEKHG4BQ96PX9 1271 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 SRPK1Q96SB4 655 aaKnown RBP14.26□□□□□ -0.13
HMGN3-201ENST00000275036 APOL2Q9BQE5 337 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 FICDQ9BVA6 458 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 TRABDQ9H4I3 376 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 RMI1Q9H9A7 625 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 TRIM39Q9HCM9 518 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 IL26Q9NPH9 171 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 RAD18Q9NS91 495 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 SLC23A2Q9UGH3 650 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 LOXL2Q9Y4K0 774 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 RHPN2P1A8MT19 583 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 GAPDHSO14556 408 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-201ENST00000275036 CHUKO15111 745 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 PRB1P04280 392 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 CD1CP29017 333 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 ALDH4A1P30038 563 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 SLC5A2P31639 672 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 CSF2RBP32927 897 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 CETN2P41208 172 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 GEMP55040 296 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 MSLNQ13421 630 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-201ENST00000275036 AMZ1Q400G9 498 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 NKAIN2Q5VXU1 208 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 ITPRIPL1Q6GPH6 555 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 RANBP10Q6VN20 620 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 USP53Q70EK8 1073 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 GLT6D1Q7Z4J2 308 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 ZNF761Q86XN6 746 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-201ENST00000275036 PHYKPLQ8IUZ5 450 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 ZNF547Q8IVP9 402 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 TXLNBQ8N3L3 684 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 SFRP1Q8N474 314 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 SPATA13Q96N96 652 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 TMEM74Q96NL1 305 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 VPS35Q96QK1 796 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 UBL7Q96S82 380 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-201ENST00000275036 FSD1LQ9BXM9 530 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 HACD3Q9P035 362 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 TMEM9Q9P0T7 183 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 PISDQ9UG56 409 aa14.25□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A9O60656 530 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 C1QL1O75973 258 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 ANXA9O76027 345 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A6P19224 532 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A1P22309 533 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A4P22310 534 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A3P35503 534 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 MLLT3P42568 568 aaPredicted RBP14.24□□□□□ -0.13
HMGN3-201ENST00000275036 FASLGP48023 281 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 GDF10P55107 478 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 GSDMDP57764 484 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 SRSF6Q13247 344 aaKnown RBP14.24□□□□□ -0.13
HMGN3-201ENST00000275036 EIF3IQ13347 325 aaKnown RBP14.24□□□□□ -0.13
HMGN3-201ENST00000275036 PEX6Q13608 980 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 CHRNA6Q15825 494 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 PLA2G4EQ3MJ16 856 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 MAP9Q49MG5 647 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.24□□□□□ -0.13
HMGN3-201ENST00000275036 ARHGAP40Q5TG30 622 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 CRTC3Q6UUV7 619 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 GPR155Q7Z3F1 870 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 KLHDC8BQ8IXV7 354 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 RNF10Q8N5U6 811 aaKnown RBP14.24□□□□□ -0.13
HMGN3-201ENST00000275036 RCBTB1Q8NDN9 531 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 PMEPA1Q969W9 287 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 DPH1Q9BZG8 443 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 STRADBQ9C0K7 418 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A7Q9HAW7 530 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A10Q9HAW8 530 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 UGT1A8Q9HAW9 530 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 PRDM8Q9NQV8 689 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 KLC4Q9NSK0 619 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 FOXJ2Q9P0K8 574 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 GUCA1BQ9UMX6 200 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 KCTD3Q9Y597 815 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 PCDHGA7Q9Y5G6 932 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 ARL5AQ9Y689 179 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 SDK2Q58EX2 2172 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 BAHCC1Q9P281 2608 aa14.24□□□□□ -0.13
HMGN3-201ENST00000275036 FASNP49327 2511 aaKnown RBP14.23□□□□□ -0.13
HMGN3-201ENST00000275036 KALRNO60229 2985 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 IGHV1OR21-1A0A087WYE8 117 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 PRAMEF33A0A0G2JMD5 474 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 IGHV5-10-1A0A0J9YXX1 117 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 C5orf60A6NFR6 353 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 PRR19A6NJB7 356 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 GOLGA6L6A8MZA4 724 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 GPR89AB7ZAQ6 455 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 C9orf172C9J069 976 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms