RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MIOSQ9NXC5 875 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 SLC17A6Q9P2U8 582 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 SCN11AQ9UI33 1791 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 NOVP48745 357 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 TOP3AQ13472 1001 aaPredicted RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 RFTN1Q14699 578 aaPredicted RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 PSRC1Q6PGN9 363 aaPredicted RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 POP5Q969H6 163 aaKnown RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 CLIC5Q9NZA1 410 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 NUP188Q5SRE5 1749 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 DNM1LO00429 736 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 TTKP33981 857 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 SSR2P43308 183 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 COPZ1P61923 177 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 CAP1Q01518 475 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 ATAT1Q5SQI0 421 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 ADGRF1Q5T601 910 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 RINLQ6ZS11 566 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 SIDT2Q8NBJ9 832 aaKnown RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 VPS35Q96QK1 796 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 SMOQ99835 787 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 CCSER2Q9H7U1 834 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 PALMDQ9NP74 551 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 RWDD3Q9Y3V2 267 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 YIPF1Q9Y548 306 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 RNASEH2AO75792 299 aaKnown RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 CCDC159P0C7I6 412 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 UROSP10746 265 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 SLC6A2P23975 617 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 CCND3P30281 292 aaPredicted RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 FOLH1Q04609 750 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 KCNJ11Q14654 390 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 PGAM4Q8N0Y7 254 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 SFRP1Q8N474 314 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 WDR36Q8NI36 951 aaKnown RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 HBEGFQ99075 208 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 ABCB8Q9NUT2 735 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 POLR3BQ9NW08 1133 aaPredicted RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 SMIM31A0A1B0GVY4 71 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 OR10H2O60403 315 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 MLLT6P55198 1093 aaPredicted RBP13.89□□□□□ -0.19
CDH3-201ENST00000264012 CYP4F2P78329 520 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 C16orf72Q14CZ0 275 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 PIGWQ7Z7B1 504 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 AIF1LQ9BQI0 150 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 CERS4Q9HA82 394 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 S100A14Q9HCY8 104 aa13.89□□□□□ -0.19
CDH3-201ENST00000264012 CCDC162PA2VCL2 907 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 SUV39H1O43463 412 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 TIPRLO75663 272 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 IDH3AP50213 366 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 SLC9A4Q6AI14 798 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 TBC1D21Q8IYX1 336 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 UNC5BQ8IZJ1 945 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 OR4A15Q8NGL6 344 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 OR13C4Q8NGS5 318 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 INTS10Q9NVR2 710 aaKnown RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 EIF2B4Q9UI10 523 aaKnown RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 SATB2Q9UPW6 733 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 SLC9A8Q9Y2E8 581 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 COMMD3-BMI1R4GMX3 469 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 PER2O15055 1255 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 NPHS1O60500 1241 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 OR4F21O95013 312 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 USP46P62068 366 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 GTF2H2Q13888 395 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 GTF2H2CQ6P1K8 395 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 MSANTD2Q6P1R3 559 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 C2orf73Q8N5S3 287 aaPredicted RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 CENPIQ92674 756 aaPredicted RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 XYLT2Q9H1B5 865 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 MFSD1Q9H3U5 465 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 ADGRE2Q9UHX3 823 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 ADAM30Q9UKF2 790 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 ASB3Q9Y575 518 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 GOLGA4Q13439 2230 aaKnown RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 FAM25AB3EWG3 89 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 FAM25CB3EWG5 89 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 FAM25GB3EWG6 89 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 C9JVG2 144 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 MED26O95402 600 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 TSPAN19P0C672 248 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 MAGEA10P43363 369 aaPredicted RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 DGKGP49619 791 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 MANFP55145 182 aaKnown RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 SMIM11AP58511 58 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 BROXQ5VW32 411 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 ESAMQ96AP7 390 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 SMOC2Q9H3U7 446 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 ZNF358Q9NW07 568 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 CIDEBQ9UHD4 219 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 CXorf49A8MYA2 514 aaPredicted RBP13.88□□□□□ -0.19
CDH3-201ENST00000264012 SERPINB7O75635 380 aa13.88□□□□□ -0.19
CDH3-201ENST00000264012 GSTT1P30711 240 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms