RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TRPV5Q9NQA5 729 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PFDN4Q9NQP4 134 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SNX15Q9NRS6 342 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PNPOQ9NVS9 261 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 DONSONQ9NYP3 566 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 TMEM120BA0PK00 339 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 EEF1A2Q05639 463 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PARP6Q2NL67 630 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC25A45Q8N413 288 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 GPATCH11Q8N954 259 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 COMMD8Q9NX08 183 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 ZDHHC7Q9NXF8 308 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CACNA2D2Q9NY47 1150 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FADS3Q9Y5Q0 445 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 STX16-NPEPL1H3BU86 382 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CDH16O75309 829 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FBXO21O94952 628 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 APOEP02649 317 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 TSPAN8P19075 237 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SDC4P31431 198 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 GGT5P36269 586 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 NR2C2P49116 596 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SH3BGRP55822 239 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 RPS14P62263 151 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF793Q6ZN11 406 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM129CQ86XR2 697 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 WDR20Q8TBZ3 569 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FUZQ9BT04 418 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 GATA5Q9BWX5 397 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM129AQ9BZQ8 928 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 NMUR2Q9GZQ4 415 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 IL21RQ9HBE5 538 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 BCAP29Q9UHQ4 241 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PILRAQ9UKJ1 303 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SCINQ9Y6U3 715 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 DYNC2H1Q8NCM8 4307 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 A0A088AWK7 358 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CXorf51AA0A1B0GTR3 108 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SMAPO00193 183 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 MOCS2O96007 188 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 MLNP12872 115 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CTPS1P17812 591 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 KRT4P19013 534 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CCR1P32246 355 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 GRIA2P42262 883 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 ATP1A2P50993 1020 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 AIF1P55008 147 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 GALNT1Q10472 559 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 EIF2B5Q13144 721 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 TAF12Q16514 161 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 HMBOX1Q6NT76 420 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CAPN12Q6ZSI9 719 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 C2orf15Q8WU43 125 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FBXO32Q969P5 355 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CERS2Q96G23 380 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 TNIP3Q96KP6 325 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 BTBD2Q9BX70 525 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 HBS1LQ9Y450 684 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 SDHDO14521 159 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 EIF3HO15372 352 aaKnown RBP eCLIP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CD9P21926 228 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 HNRNPH2P55795 449 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CNTN1Q12860 1018 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF385BQ569K4 471 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CHST9Q7L1S5 443 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 CCDC50Q8IVM0 306 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 PPIL6Q8IXY8 311 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 DCAF4L2Q8NA75 395 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 HDAC10Q969S8 669 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM136AQ96C01 138 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 TMEM9Q9P0T7 183 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 ACACBO00763 2458 aa5.56□□□□□ -1.52
TOPBP1-201ENST00000260810 OR2W5A6NFC9 320 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 MCF2LO15068 1137 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC34A2O95436 690 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 RPS17P08708 135 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 MST1P26927 711 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 RPL10P27635 214 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 HOXD10P28358 340 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TCF15Q12870 199 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TRPC3Q13507 836 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 LBRQ14739 615 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 UGP2Q16851 508 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 POM121L1PQ3SYA9 428 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 RNF219Q5W0B1 726 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 EPHX4Q8IUS5 362 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 BAHD1Q8TBE0 780 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 IFT81Q8WYA0 676 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 ELSPBP1Q96BH3 223 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CPEB1Q9BZB8 566 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 NTN4Q9HB63 628 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 SMOXQ9NWM0 555 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 B4GALT6Q9UBX8 382 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 CD300AQ9UGN4 299 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 TBK1Q9UHD2 729 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 MAGED2Q9UNF1 606 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 PRKAB1Q9Y478 270 aa5.55□□□□□ -1.52
TOPBP1-201ENST00000260810 ARIH1Q9Y4X5 557 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms