RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 MRPS5P82675 430 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 RPL6Q02878 288 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TMEM132BQ14DG7 1078 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 SNAPC1Q16533 368 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 NFE2Q16621 373 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 FSTL4Q6MZW2 842 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 PRR23BQ6ZRT6 265 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 C15orf52Q6ZUT6 534 aaKnown RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ANKS1BQ7Z6G8 1248 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF410Q86VK4 478 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TNKS2Q9H2K2 1166 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 TBC1D14Q9P2M4 693 aa9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 WRAP73Q9P2S5 460 aaPredicted RBP9.69□□□□□ -0.86
CTDSPL2-201ENST00000260327 ELOVL7A1L3X0 281 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SPATA31C2B4DYI2 1134 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 AP3D1O14617 1153 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 DGKAP23743 735 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ADORA2AP29274 412 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GLIS1Q8NBF1 620 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 LRRC15Q8TF66 581 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 STARD8Q92502 1023 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 LINGO1Q96FE5 620 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 FBXL20Q96IG2 436 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 FCRL4Q96PJ5 515 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 KLHL5Q96PQ7 755 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 EMILIN2Q9BXX0 1053 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PDGFDQ9GZP0 370 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF358Q9NW07 568 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 VPS4AQ9UN37 437 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PCDHB12Q9Y5F1 795 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 DHX15O43143 795 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ANXA5P08758 320 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PTPRAP18433 802 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 MAGEA8P43361 318 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC9A3P48764 834 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GPAT3Q53EU6 434 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TXNRD3NBQ6F5E7 133 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 OR4A15Q8NGL6 344 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC39A3Q9BRY0 314 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GPN1Q9HCN4 374 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PCDHB5Q9Y5E4 795 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLIT3O75094 1523 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 OR56A5P0C7T3 313 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GAD2Q05329 585 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 RBBP4Q09028 425 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PPP1R8Q12972 351 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TUBA3CQ13748 450 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PSMD5Q16401 504 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 MOGQ16653 247 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GPR158Q5T848 1215 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TATDN1Q6P1N9 297 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 PHACTR4Q8IZ21 702 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 OR10A6Q8NH74 314 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 C18orf25Q96B23 403 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 HERC2P3Q9BVR0 1158 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 C11orf16Q9NQ32 467 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 RGL2O15211 777 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 OR6A2O95222 327 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TNNI3P19429 210 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TIE1P35590 1138 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 MTPNP58546 118 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SCRN3Q0VDG4 424 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 RAPSNQ13702 412 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF517Q6ZMY9 492 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 MPP5Q8N3R9 675 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 KBTBD7Q8WVZ9 684 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ISOC1Q96CN7 298 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TBCCD1Q9NVR7 557 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 M0R2N6 131 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TNFRSF11BO00300 401 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 FGF10O15520 208 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 OTCP00480 354 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ARL4DP49703 201 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SCNN1GP51170 649 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 FAM171A1Q5VUB5 890 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SDHAF4Q5VUM1 108 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 GHDCQ8N2G8 530 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ENDOVQ8N8Q3 282 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SYNDIG1Q9H7V2 258 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZFYVE1Q9HBF4 777 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 RAB23Q9ULC3 237 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZSCAN5BA6NJL1 495 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 H3BM21 787 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 CCNDBP1O95273 360 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 LYPLA2O95372 231 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ATXN1P54253 815 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 MFSD10Q14728 455 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 WSCD2Q2TBF2 565 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC25A52Q3SY17 297 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 TPRG1LQ5T0D9 272 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF280DQ6N043 979 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 SPATA19Q7Z5L4 167 aa9.68□□□□□ -0.86
CTDSPL2-201ENST00000260327 RIOX2Q8IUF8 465 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms