RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CD68P34810 354 aaPredicted RBP18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 MAGEA1P43355 309 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 TCEAL1Q15170 157 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 SPOCD1Q6ZMY3 1216 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 SLC9B2Q86UD5 537 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 PHYKPLQ8IUZ5 450 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 TRAM1L1Q8N609 369 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 TFB1MQ8WVM0 346 aaKnown RBP18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 GLYATL1Q969I3 302 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 HAUS1Q96CS2 278 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 DPYSL5Q9BPU6 564 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 HERPUD2Q9BSE4 406 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 TBC1D10AQ9BXI6 508 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 STN1Q9H668 368 aaKnown RBP18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 SCHIP1Q9P0W5 487 aaPredicted RBP18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 CPNE7Q9UBL6 633 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 KLHL3Q9UH77 587 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 DNAJC16Q9Y2G8 782 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 PCDHGA3Q9Y5H0 932 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 ALG6Q9Y672 507 aa18.77■□□□□ 0.6
TM6SF1-201ENST00000258909 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 NFKB1P19838 968 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 MARCKSL1P49006 195 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 DCDC1P59894 354 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 WASHC5Q12768 1159 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 TFDP2Q14188 446 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 TAZQ16635 292 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 KHDC1Q4VXA5 237 aaKnown RBP18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 ANKS6Q68DC2 871 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 CCDC70Q6NSX1 233 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 ZC3H18Q86VM9 953 aaKnown RBP18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 CCDC112Q8NEF3 446 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 NKD1Q969G9 470 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 PLEKHG4BQ96PX9 1271 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 CTRCQ99895 268 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 ANP32EQ9BTT0 268 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 B3GNT4Q9C0J1 378 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 PDP2Q9P2J9 529 aa18.77■□□□□ 0.59
TM6SF1-201ENST00000258909 FLNBO75369 2602 aaKnown RBP18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 UGT1A3P35503 534 aa18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 NR2C2P49116 596 aa18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 SEPT7Q16181 437 aaKnown RBP18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 INSCQ1MX18 579 aa18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 WDR74Q6RFH5 385 aaPredicted RBP18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 SLC25A41Q8N5S1 370 aa18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 SH3KBP1Q96B97 665 aa18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 RAD18Q9NS91 495 aa18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 TMPRSS11EQ9UL52 423 aa18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 TLN1Q9Y490 2541 aaKnown RBP18.76■□□□□ 0.59
TM6SF1-201ENST00000258909 KIR2DS5A0A0G2JLQ3 304 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 A0A0G2JNG1 304 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 B8ZZF3 427 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 PYCARD-AS1I3L0S3 204 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 KIR2DS3K7RE56 304 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 CHUKO15111 745 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 PSTPIP1O43586 416 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 SLC2A4P14672 509 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 CHRNA4P43681 627 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 WNT3AP56704 352 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 KIR2DS5Q14953 304 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 SLC14A2Q15849 920 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 KDELC1Q6UW63 502 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 BZW1Q7L1Q6 419 aaKnown RBP18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 ARHGAP22Q7Z5H3 698 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 BMPERQ8N8U9 685 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 TC2NQ8N9U0 490 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 ZSCAN1Q8NBB4 408 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 HTR3CQ8WXA8 447 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 P3H4Q92791 437 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 ARHGAP9Q9BRR9 750 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 DDA1Q9BW61 102 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 KLHL8Q9P2G9 620 aaPredicted RBP18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 NFKBIL1Q9UBC1 381 aaPredicted RBP18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 FAM153AQ9UHL3 310 aa18.75■□□□□ 0.59
TM6SF1-201ENST00000258909 B4E171 279 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 FAM87AP0C7U9 286 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 ZNF7P17097 686 aaPredicted RBP18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 TSPAN7P41732 249 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 ATP1A2P50993 1020 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 UBE2IP63279 158 aaKnown RBP18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 ATP13A5Q4VNC0 1218 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 SIRPB2Q5JXA9 342 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 DCAF12Q5T6F0 453 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 PDPK2PQ6A1A2 396 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 LRRTM4Q86VH4 590 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 CCDC50Q8IVM0 306 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 ZNF547Q8IVP9 402 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 ZNF567Q8N184 647 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 IL22RA1Q8N6P7 574 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 OXNAD1Q96HP4 312 aaPredicted RBP18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 ASPSCR1Q9BZE9 553 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 TRIM5Q9C035 493 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 C10orf88Q9H8K7 445 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 APMAPQ9HDC9 416 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 TRIM10Q9UDY6 481 aa18.74■□□□□ 0.59
TM6SF1-201ENST00000258909 hCG_1818297A0A087WSY0 165 aa18.73■□□□□ 0.59
TM6SF1-201ENST00000258909 LOC285095A0A1B0GVY8 99 aa18.73■□□□□ 0.59
TM6SF1-201ENST00000258909 OR5K4A6NMS3 321 aa18.73■□□□□ 0.59
TM6SF1-201ENST00000258909 PDZK1P1A8MUH7 402 aa18.73■□□□□ 0.59
TM6SF1-201ENST00000258909 BUD23O43709 281 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms