RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ATG2BQ96BY7 2078 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 SNX2O60749 519 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 CD160O95971 181 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 UGT2B4P06133 528 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 ZNF37AP17032 561 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 CTNNB1P35222 781 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 MNX1P50219 401 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 PABPC1LQ4VXU2 614 aaKnown RBP14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 FRA10AC1Q70Z53 315 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 TMEM25Q86YD3 366 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 FBXO39Q8N4B4 442 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 C3orf30Q96M34 536 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 CIPCQ9C0C6 399 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 ZMYM5Q9UJ78 669 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 SDK1Q7Z5N4 2213 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 TTC36A6NLP5 189 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 H3BSA7 217 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 UBDO15205 165 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 PRAMEF1O95521 474 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 XRCC1P18887 633 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 CCR2P41597 374 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 LMAN2Q12907 356 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 CYP2R1Q6VVX0 501 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 ELMOD1Q8N336 334 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 CYB5D2Q8WUJ1 264 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 EGFL8Q99944 293 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 C17orf80Q9BSJ5 609 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 SLC46A2Q9BY10 475 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 ZDHHC7Q9NXF8 308 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 HSFX1Q9UBD0 423 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 F5P12259 2224 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 TARM1B6A8C7 271 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 GIPC1O14908 333 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 F11P03951 625 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 LAG3P18627 525 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 CA5AP35218 305 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 GDF5P43026 501 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 MAPK10P53779 464 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 SH3BP2P78314 561 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 RAD51Q06609 339 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 RAB33AQ14088 237 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 ACAP2Q15057 778 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 ARMCX6Q7L4S7 300 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 DSELQ8IZU8 1212 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 HJURPQ8NCD3 748 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 ZFP28Q8NHY6 868 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 NUDT8Q8WV74 236 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 TMIGD2Q96BF3 282 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 HACD3Q9P035 362 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 GMPR2Q9P2T1 348 aaKnown RBP14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 TBC1D30Q9Y2I9 924 aa14.53□□□□□ -0.08
TRAFD1-201ENST00000257604 REV3LO60673 3130 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 DNAJA2O60884 412 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 CLASP2O75122 1294 aaKnown RBP14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 CD1DP15813 335 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 CBLBQ13191 982 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 TPGS2Q68CL5 300 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 KBTBD6Q86V97 674 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 PQLC1Q8N2U9 271 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 CDYL2Q8N8U2 506 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 LRGUKQ96M69 825 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 BBS2Q9BXC9 721 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 MRPL1Q9BYD6 325 aaKnown RBP14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 MRM3Q9HC36 420 aaKnown RBP14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 PRKAG2Q9UGJ0 569 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 CRLS1Q9UJA2 301 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 AP4B1Q9Y6B7 739 aa14.52□□□□□ -0.08
TRAFD1-201ENST00000257604 NR5A2O00482 541 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 SDHDO14521 159 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 COL6A2P12110 1019 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 PPARGP37231 505 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 THOP1P52888 689 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 PRKAA2P54646 552 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 TEAD2Q15562 447 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 MYLK3Q32MK0 819 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 RETSATQ6NUM9 610 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 C12orf76Q8N812 135 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 ADAMTS19Q8TE59 1207 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 EID2BQ96D98 161 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 DGCR14Q96DF8 476 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 MYO19Q96H55 970 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 ZFRQ96KR1 1074 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 AARSD1Q9BTE6 412 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 C2orf49Q9BVC5 232 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 EML4Q9HC35 981 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 ASAH2Q9NR71 780 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 EIF2B4Q9UI10 523 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 ASB1Q9Y576 335 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 WNT6Q9Y6F9 365 aa14.52□□□□□ -0.09
TRAFD1-201ENST00000257604 VPS26AO75436 327 aa14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 PRMT2P55345 433 aa14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 CDKL1Q00532 357 aa14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 TSTA3Q13630 321 aaPredicted RBP14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 FASTKQ14296 549 aaKnown RBP14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 GRM2Q14416 872 aa14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 UGT3A1Q6NUS8 523 aa14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 Q6ZVU0 165 aa14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 ADGRG6Q86SQ4 1221 aa14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 SETD3Q86TU7 594 aaPredicted RBP14.51□□□□□ -0.09
TRAFD1-201ENST00000257604 ITIH5Q86UX2 942 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms