RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ODR4Q5SWX8 454 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 MROH9Q5TGP6 573 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 RETSATQ6NUM9 610 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TMEM65Q6PI78 240 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 SPRED1Q7Z699 444 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 DNAAF5Q86Y56 855 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 RCOR2Q8IZ40 523 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 CNTD1Q8N815 330 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TMEM35BQ8NCS4 154 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 OR13J1Q8NGT2 312 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TAS1R2Q8TE23 839 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 PPWD1Q96BP3 646 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TEKT5Q96M29 485 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 SLC9A7Q96T83 725 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 POLR3FQ9H1D9 316 aaPredicted RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 POLE3Q9NRF9 147 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 TEKT2Q9UIF3 430 aa11.76□□□□□ -0.53
CCNA1-201ENST00000255465 COPG1Q9Y678 874 aaKnown RBP11.76□□□□□ -0.53
CCNA1-201ENST00000255465 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 PRR23AA6NEV1 266 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 PLA2G4BP0C869 781 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 MX2P20592 715 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 GLRA2P23416 452 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 HMGCLP35914 325 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 NUDT2P50583 147 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 SLC12A3P55017 1021 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 MS4A2Q01362 244 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 SLC13A2Q13183 592 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 CEACAM7Q14002 265 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 DRAP1Q14919 205 aaPredicted RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 FAM102BQ5T8I3 360 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 STEAP3Q658P3 488 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 PM20D1Q6GTS8 502 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 BRAT1Q6PJG6 821 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 ZNF782Q6ZMW2 699 aaPredicted RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 RTN4RL1Q86UN2 441 aaPredicted RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 STX12Q86Y82 276 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 TXNDC5Q8NBS9 432 aaKnown RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 RNF149Q8NC42 400 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 GLIS3Q8NEA6 775 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 OR10T2Q8NGX3 314 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 PSMA8Q8TAA3 256 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 ZNF564Q8TBZ8 553 aaPredicted RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 DYNC2LI1Q8TCX1 351 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 LRTOMTQ8WZ04 291 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 MYDGFQ969H8 173 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 SERAC1Q96JX3 654 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 ARL5BQ96KC2 179 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 PELOQ9BRX2 385 aaKnown RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 FTHL17Q9BXU8 183 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 ZFP14Q9HCL3 533 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.75□□□□□ -0.53
CCNA1-201ENST00000255465 DTX4Q9Y2E6 619 aa11.75□□□□□ -0.53
CCNA1-201ENST00000255465 F8W036 122 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 PDXKO00764 312 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 DLGAP1O14490 977 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 TSPAN4O14817 238 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 STX7O15400 261 aaKnown RBP11.74□□□□□ -0.53
CCNA1-201ENST00000255465 GMDSO60547 372 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 RASAL1O95294 804 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 ALAS2P22557 587 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 UBE3AQ05086 875 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 CAPSQ13938 189 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 SEMA3AQ14563 771 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 MAPK11Q15759 364 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 PARP15Q460N3 678 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 MTX3Q5HYI7 312 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 C1orf186Q6ZWK4 172 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 TMCO2Q7Z6W1 182 aaPredicted RBP11.74□□□□□ -0.53
CCNA1-201ENST00000255465 AMIGO1Q86WK6 493 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 HID1Q8IV36 788 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 CCDC36Q8IYA8 594 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 BPIFB6Q8NFQ5 453 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 WDR48Q8TAF3 677 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 LINC01599Q8WXQ3 324 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 DNAJC19Q96DA6 116 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 LRCH3Q96II8 777 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 SLC45A3Q96JT2 553 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 CPXM1Q96SM3 734 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 TMEM245Q9H330 911 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 EPS8L2Q9H6S3 715 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 PCDH9Q9HC56 1237 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 KLHL21Q9UJP4 597 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 PNMA8CA0A1B0GUJ8 204 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 EEF2KO00418 725 aaKnown RBP11.74□□□□□ -0.53
CCNA1-201ENST00000255465 GNB5O14775 395 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 AVILO75366 819 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 PSIP1O75475 530 aaKnown RBP11.74□□□□□ -0.53
CCNA1-201ENST00000255465 PPM1BO75688 479 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 AMHP03971 560 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 SERPINE1P05121 402 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 ITGALP20701 1170 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 NR2F2P24468 414 aa11.74□□□□□ -0.53
CCNA1-201ENST00000255465 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
CCNA1-201ENST00000255465 POU5F1BQ06416 359 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms