RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PPP2R2BQ00005 443 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 EMX2Q04743 252 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 C19orf57Q0VDD7 668 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 TMEM236Q5W0B7 351 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 ARHGAP17Q68EM7 881 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 KIAA1841Q6NSI8 718 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 ZNF544Q6NX49 715 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 MCFD2Q8NI22 146 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 SUN5Q8TC36 379 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 PROX1Q92786 737 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 TSPAN17Q96FV3 270 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 REXO5Q96IC2 774 aaKnown RBP20.3■□□□□ 0.84
RARA-201ENST00000254066 AMBRA1Q9C0C7 1298 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 CDHR5Q9HBB8 845 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.3■□□□□ 0.84
RARA-201ENST00000254066 SLCO3A1Q9UIG8 710 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 LEF1Q9UJU2 399 aaPredicted RBP20.3■□□□□ 0.84
RARA-201ENST00000254066 FBXO5Q9UKT4 447 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 NRCAMQ92823 1304 aa20.3■□□□□ 0.84
RARA-201ENST00000254066 PABPN1LA6NDY0 278 aaKnown RBP20.29■□□□□ 0.84
RARA-201ENST00000254066 HUS1O60921 280 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CPB1P15086 417 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 TPH1P17752 444 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 UGT2B10P36537 528 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 ST13P50502 369 aaKnown RBP20.29■□□□□ 0.84
RARA-201ENST00000254066 KCNK10P57789 538 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 VBP1P61758 197 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 RCAN2Q14206 197 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CDK10Q15131 360 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 RFX4Q33E94 735 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 RABL3Q5HYI8 236 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 PNCKQ6P2M8 343 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 SPATA19Q7Z5L4 167 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CDR2LQ86X02 465 aaPredicted RBP20.29■□□□□ 0.84
RARA-201ENST00000254066 FAM131BQ86XD5 332 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 DENND6AQ8IWF6 608 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 DNAJB14Q8TBM8 379 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 LRRC3Q9BY71 257 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 C3orf18Q9UK00 162 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 A6NL46 340 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CLDN24A6NM45 220 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 SLC16A6O15403 523 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CNTN5O94779 1100 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 SLC26A3P40879 764 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CHRNB3Q05901 458 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CTBP1Q13363 440 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 ZC3H12BQ5HYM0 836 aaKnown RBP20.29■□□□□ 0.84
RARA-201ENST00000254066 GLYATQ6IB77 296 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 DESI1Q6ICB0 168 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 GRPEL2Q8TAA5 225 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CCDC90BQ9GZT6 254 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 CHST12Q9NRB3 414 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 FKBP14Q9NWM8 211 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 DNAJB9Q9UBS3 223 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 TMA7Q9Y2S6 64 aaKnown RBP20.29■□□□□ 0.84
RARA-201ENST00000254066 DNAJC15Q9Y5T4 150 aa20.29■□□□□ 0.84
RARA-201ENST00000254066 AGAP5A6NIR3 686 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 EEF2KO00418 725 aaKnown RBP20.28■□□□□ 0.84
RARA-201ENST00000254066 JUNDP17535 347 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 PAMP19021 973 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 NFKB1P19838 968 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 YBX1P67809 324 aaKnown RBP20.28■□□□□ 0.84
RARA-201ENST00000254066 PIGFQ07326 219 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 PLEKHG6Q3KR16 790 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 FAM160B1Q5W0V3 765 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 EEF1DP3Q658K8 133 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 PLD3Q8IV08 490 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 LGALS12Q96DT0 336 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 TPRKBQ9Y3C4 175 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 TRIP11Q15643 1979 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 LOC100130705A0A1B0GUX0 176 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 FAM92AA1XBS5 289 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 SNX4O95219 450 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 MT-ND1P03886 318 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 ABCB1P08183 1280 aaPredicted RBP20.28■□□□□ 0.84
RARA-201ENST00000254066 CHRM3P20309 590 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 AGXTP21549 392 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 CXCR4P61073 352 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 SP2Q02086 613 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 KCNAB2Q13303 367 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 CCDC58Q4VC31 144 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 FKBP1CQ5VVH2 108 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 SULT1C3Q6IMI6 304 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 MICALL2Q8IY33 904 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 IL17RDQ8NFM7 739 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 OR6F1Q8NGZ6 308 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 GIPC2Q8TF65 315 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 FAM167AQ96KS9 214 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 UGT2B28Q9BY64 529 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 ALOXE3Q9BYJ1 711 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 KAT8Q9H7Z6 458 aaKnown RBP20.28■□□□□ 0.84
RARA-201ENST00000254066 ZNF70Q9UC06 446 aaPredicted RBP20.28■□□□□ 0.84
RARA-201ENST00000254066 GPR45Q9Y5Y3 372 aa20.28■□□□□ 0.84
RARA-201ENST00000254066 PTGES3LE9PB15 166 aa20.27■□□□□ 0.84
RARA-201ENST00000254066 AXIN1O15169 862 aa20.27■□□□□ 0.84
RARA-201ENST00000254066 CRYZL1O95825 349 aa20.27■□□□□ 0.84
RARA-201ENST00000254066 MT-CO1P00395 513 aa20.27■□□□□ 0.84
RARA-201ENST00000254066 MTHFRP42898 656 aa20.27■□□□□ 0.84
RARA-201ENST00000254066 SLC1A2P43004 574 aa20.27■□□□□ 0.84
RARA-201ENST00000254066 AIF1P55008 147 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms