RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 GPN2Q9H9Y4 310 aaPredicted RBP18.81■□□□□ 0.6
SNX4-201ENST00000251775 GIMAP2Q9UG22 337 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 PSME2Q9UL46 239 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 TCRBV5S2A0A599 114 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 KRBA1A5PL33 1030 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 TBX18O95935 607 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 SLC10A3P09131 477 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 RHOQP17081 205 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 EFEMP1Q12805 493 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 MARC1Q5VT66 337 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 AGAP9Q5VTM2 703 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 GLB1LQ6UWU2 654 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 KIAA0408Q6ZU52 694 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 DCP1BQ8IZD4 617 aaKnown RBP18.81■□□□□ 0.6
SNX4-201ENST00000251775 OR13J1Q8NGT2 312 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 PSMG2Q969U7 264 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.81■□□□□ 0.62e-7■■■■■ 62.8
SNX4-201ENST00000251775 TAMM41Q96BW9 452 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 TMEM248Q9NWD8 314 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 FNIP2Q9P278 1114 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 PRG3Q9Y2Y8 225 aaPredicted RBP18.81■□□□□ 0.6
SNX4-201ENST00000251775 VWA7Q9Y334 891 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 TMED5Q9Y3A6 229 aa18.81■□□□□ 0.6
SNX4-201ENST00000251775 H0Y858 1186 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 CCL22O00626 93 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 ANGPT2O15123 496 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 OR1G1P47890 313 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 LEPRP48357 1165 aaKnown RBP18.8■□□□□ 0.6
SNX4-201ENST00000251775 FCGRTP55899 365 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 TRIM16LQ309B1 348 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 TBPL2Q6SJ96 375 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 RAB2BQ8WUD1 216 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 IGSF8Q969P0 613 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 LRRC58Q96CX6 371 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 C8orf48Q96LL4 319 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 LHPPQ9H008 270 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 TLR9Q9NR96 1032 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 RGS18Q9NS28 235 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 SEPT3Q9UH03 358 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 PCDHA9Q9Y5H5 950 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 LTA4HP09960 611 aaKnown RBP18.8■□□□□ 0.6
SNX4-201ENST00000251775 JAK1P23458 1154 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 EEF1B2P24534 225 aaKnown RBP18.8■□□□□ 0.6
SNX4-201ENST00000251775 IDUAP35475 653 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 PRKCZQ05513 592 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 BCL2A1Q16548 175 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 GTF2IRD2BQ6EKJ0 949 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 BTLAQ7Z6A9 289 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 LDB1Q86U70 411 aaPredicted RBP18.8■□□□□ 0.6
SNX4-201ENST00000251775 GTF2IRD2Q86UP8 949 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 ZIC5Q96T25 663 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 SP110Q9HB58 689 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 INTS10Q9NVR2 710 aaKnown RBP18.8■□□□□ 0.6
SNX4-201ENST00000251775 ZNF639Q9UID6 485 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 PTGDR2Q9Y5Y4 395 aa18.8■□□□□ 0.6
SNX4-201ENST00000251775 SLC2A3P11169 496 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 IMPDH1P20839 514 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 OXA1LQ15070 435 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 SLC22A9Q8IVM8 553 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 PGBD5Q8N414 524 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 PAPD5Q8NDF8 572 aaKnown RBP18.79■□□□□ 0.6
SNX4-201ENST00000251775 ANKRD49Q8WVL7 239 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 LINC01599Q8WXQ3 324 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 MUS81Q96NY9 551 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 FBXO44Q9H4M3 255 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 CPQQ9Y646 472 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 SOAT2O75908 522 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 SUPT7LO94864 414 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 MT-ND1P03886 318 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 RBP1P09455 135 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 GSTT2P0CG29 244 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 GSTT2BP0CG30 244 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 NCK1P16333 377 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 OPRL1P41146 370 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 ARSDP51689 593 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 BFSP2Q13515 415 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 TUBA3CQ13748 450 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 LDLRAP1Q5SW96 308 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 ZNF362Q5T0B9 420 aaPredicted RBP18.79■□□□□ 0.6
SNX4-201ENST00000251775 FBXL22Q6P050 247 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 SFRP1Q8N474 314 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 ATAD1Q8NBU5 361 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 CALML6Q8TD86 181 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 FUBP3Q96I24 572 aaKnown RBP eCLIP18.79■□□□□ 0.67e-9■■■■□ 26.1
SNX4-201ENST00000251775 SLC30A3Q99726 388 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 TRMOQ9BU70 441 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 GIN1Q9NXP7 522 aa18.79■□□□□ 0.6
SNX4-201ENST00000251775 H0YAE9 185 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 KPNA4O00629 521 aaPredicted RBP18.78■□□□□ 0.6
SNX4-201ENST00000251775 SYNCRIPO60506 623 aaKnown RBP18.78■□□□□ 0.6
SNX4-201ENST00000251775 CNOT3O75175 753 aaKnown RBP18.78■□□□□ 0.6
SNX4-201ENST00000251775 KCNC1P48547 511 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 GSK3BP49841 420 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 APLP1P51693 650 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 CAP1Q01518 475 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 GRB7Q14451 532 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 MBTPS1Q14703 1052 aa18.78■□□□□ 0.6
SNX4-201ENST00000251775 NFE2Q16621 373 aaPredicted RBP18.78■□□□□ 0.6
SNX4-201ENST00000251775 PYCR3Q53H96 274 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms