RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 NPNTQ6UXI9 565 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 CACNA2D3Q8IZS8 1091 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 BMPERQ8N8U9 685 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 GLYATL1Q969I3 302 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 TADA1Q96BN2 335 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 ZPBPQ9BS86 351 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 GLOD4Q9HC38 313 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 PRDM8Q9NQV8 689 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 KLC4Q9NSK0 619 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 SPTLC3Q9NUV7 552 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 ZNF711Q9Y462 761 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 ADGRG1Q9Y653 693 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 CAPN5O15484 640 aaPredicted RBP20.79■□□□□ 0.92
NEDD8-201ENST00000250495 MAPK9P45984 424 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 NR2C2P49116 596 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 ANKS6Q68DC2 871 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 CEACAM20Q6UY09 585 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 ADGRG6Q86SQ4 1221 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 PLXDC1Q8IUK5 500 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 VSTM4Q8IW00 320 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 SLC12A9Q9BXP2 914 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 ARFGAP3Q9NP61 516 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 FBXO8Q9NRD0 319 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 INTUQ9ULD6 942 aa20.79■□□□□ 0.92
NEDD8-201ENST00000250495 A0A0A6YYK5 440 aaPredicted RBP20.78■□□□□ 0.92
NEDD8-201ENST00000250495 CHUKO15111 745 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 KMOO15229 486 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 RAD1O60671 282 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 NDST3O95803 873 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 MT-CYBP00156 380 aaPredicted RBP20.78■□□□□ 0.92
NEDD8-201ENST00000250495 FAM87AP0C7U9 286 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 TNNT1P13805 278 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 XRCC1P18887 633 aaPredicted RBP20.78■□□□□ 0.92
NEDD8-201ENST00000250495 DYNLT1P63172 113 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 TFDP2Q14188 446 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 TCEAL1Q15170 157 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 FAM182AQ5T1J6 154 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 ZNF648Q5T619 568 aaPredicted RBP20.78■□□□□ 0.92
NEDD8-201ENST00000250495 LRRTM4Q86VH4 590 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 SPATA22Q8NHS9 363 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 HTR3CQ8WXA8 447 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 RTP4Q96DX8 246 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 TEKT5Q96M29 485 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 PLEKHG4BQ96PX9 1271 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 OSGEPL1Q9H4B0 414 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 UCK1Q9HA47 277 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 STARD5Q9NSY2 213 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 PILRAQ9UKJ1 303 aa20.78■□□□□ 0.92
NEDD8-201ENST00000250495 LILRA5A6NI73 299 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 VEGFDO43915 354 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 MFAP3LO75121 409 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 VIPP01282 170 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 SLC4A1P02730 911 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 LIFP15018 202 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 BPIP17213 487 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 ITGB6P18564 788 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 MAP4P27816 1152 aaKnown RBP20.77■□□□□ 0.92
NEDD8-201ENST00000250495 INSCQ1MX18 579 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 MFSD7Q6UXD7 560 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 PRICKLE2Q7Z3G6 844 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 EFHD1Q9BUP0 239 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 TBC1D10AQ9BXI6 508 aa20.77■□□□□ 0.92
NEDD8-201ENST00000250495 SPOPO43791 374 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 PMPCBO75439 489 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 CDK14O94921 469 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 ZNF7P17097 686 aaPredicted RBP20.76■□□□□ 0.91
NEDD8-201ENST00000250495 COMTP21964 271 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 PTPN3P26045 913 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 UBE2IP63279 158 aaKnown RBP20.76■□□□□ 0.91
NEDD8-201ENST00000250495 CRTC3Q6UUV7 619 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 TMEM26Q6ZUK4 368 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 B4GALNT4Q76KP1 1039 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 TRIM48Q8IWZ4 208 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 NLGN4XQ8N0W4 816 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 NLGN4YQ8NFZ3 816 aaPredicted RBP20.76■□□□□ 0.91
NEDD8-201ENST00000250495 TFB1MQ8WVM0 346 aaKnown RBP20.76■□□□□ 0.91
NEDD8-201ENST00000250495 CTRCQ99895 268 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 TIMM29Q9BSF4 260 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 SPRY4Q9C004 299 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 TRIT1Q9H3H1 467 aaKnown RBP20.76■□□□□ 0.91
NEDD8-201ENST00000250495 GEMIN8Q9NWZ8 242 aaKnown RBP20.76■□□□□ 0.91
NEDD8-201ENST00000250495 SLC23A2Q9UGH3 650 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 KLHL3Q9UH77 587 aa20.76■□□□□ 0.91
NEDD8-201ENST00000250495 FLNBO75369 2602 aaKnown RBP20.76■□□□□ 0.91
NEDD8-201ENST00000250495 ZNF891A8MT65 544 aaPredicted RBP20.75■□□□□ 0.91
NEDD8-201ENST00000250495 POLR1CO15160 346 aaPredicted RBP20.75■□□□□ 0.91
NEDD8-201ENST00000250495 MTSS1O43312 755 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 PPFIA2O75334 1257 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 TNNT3P45378 269 aaPredicted RBP20.75■□□□□ 0.91
NEDD8-201ENST00000250495 NOP2P46087 812 aaKnown RBP20.75■□□□□ 0.91
NEDD8-201ENST00000250495 KCNC4Q03721 635 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 PRKD1Q15139 912 aaPredicted RBP20.75■□□□□ 0.91
NEDD8-201ENST00000250495 BORAQ6PGQ7 559 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 CNGA4Q8IV77 575 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 KIAA1143Q96AT1 154 aaPredicted RBP20.75■□□□□ 0.91
NEDD8-201ENST00000250495 CATSPER2Q96P56 530 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 VPS35Q96QK1 796 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 ADNPQ9H2P0 1102 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 TRABDQ9H4I3 376 aa20.75■□□□□ 0.91
NEDD8-201ENST00000250495 UBP1Q9NZI7 540 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms