RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 C3orf30Q96M34 536 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 CYP2S1Q96SQ9 504 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 CDH7Q9ULB5 785 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 CDC14AQ9UNH5 594 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 A0A0J9YYE9 177 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 FAM149AA5PLN7 773 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 TLL1O43897 1013 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 SUPT7LO94864 414 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 ARHGEF15O94989 841 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 HTRA4P83105 476 aaPredicted RBP16.87■□□□□ 0.29
FOXA1-201ENST00000250448 ATP6AP1Q15904 470 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 HECTD2Q5U5R9 776 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 SPPL2CQ8IUH8 684 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 CFAP52Q8N1V2 620 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 WBP2Q969T9 261 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 UBXN10Q96LJ8 280 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 PPP1R2P1Q96PQ5 205 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 C9orf16Q9BUW7 83 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 RNF38Q9H0F5 515 aa16.87■□□□□ 0.29
FOXA1-201ENST00000250448 MATN3O15232 486 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 MAFKO60675 156 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 IL10P22301 178 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 PSMA4P25789 261 aaKnown RBP16.86■□□□□ 0.29
FOXA1-201ENST00000250448 ERVFC1P60507 584 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 SLC14A2Q15849 920 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF678Q5SXM1 525 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 TPGS2Q68CL5 300 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 NADSYN1Q6IA69 706 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 LCN8Q6JVE9 175 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 FBXL22Q6P050 247 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 ELMSAN1Q6PJG2 1045 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 DNAJB7Q7Z6W7 309 aaPredicted RBP16.86■□□□□ 0.29
FOXA1-201ENST00000250448 CALML6Q8TD86 181 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 L3HYPDHQ96EM0 354 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 HOPXQ9BPY8 73 aaPredicted RBP16.86■□□□□ 0.29
FOXA1-201ENST00000250448 NPLQ9BXD5 320 aaPredicted RBP16.86■□□□□ 0.29
FOXA1-201ENST00000250448 ZBP1Q9H171 429 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF334Q9HCZ1 680 aaPredicted RBP16.86■□□□□ 0.29
FOXA1-201ENST00000250448 MAP10Q9P2G4 905 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 NDUFAF1Q9Y375 327 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 INSL6Q9Y581 213 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 INSL5Q9Y5Q6 135 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 PLXNA4Q9HCM2 1894 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 GRXCR1A8MXD5 290 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 TGM5O43548 720 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 TPST1O60507 370 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 CXCL14O95715 111 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 HSD17B1P14061 328 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 FASP25445 335 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 LEPRP48357 1165 aaKnown RBP16.86■□□□□ 0.29
FOXA1-201ENST00000250448 BNIP2Q12982 314 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 SLC36A3Q495N2 470 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 C16orf87Q6PH81 154 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 RANBP10Q6VN20 620 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 FEM1CQ96JP0 617 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 SLC45A3Q96JT2 553 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 SLC22A12Q96S37 553 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 ALG9Q9H6U8 611 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 AKTIPQ9H8T0 292 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 EGFL7Q9UHF1 273 aa16.86■□□□□ 0.29
FOXA1-201ENST00000250448 HIDE1A8MVS5 230 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 SEC24DO94855 1032 aaPredicted RBP16.85■□□□□ 0.29
FOXA1-201ENST00000250448 PPM1AP35813 382 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 ATP5C1P36542 298 aaKnown RBP16.85■□□□□ 0.29
FOXA1-201ENST00000250448 LYSMD3Q7Z3D4 306 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 SLC15A3Q8IY34 581 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 GOLM1Q8NBJ4 401 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 OLA1Q9NTK5 396 aaKnown RBP16.85■□□□□ 0.29
FOXA1-201ENST00000250448 RBM22Q9NW64 420 aaKnown RBP eCLIP16.85■□□□□ 0.298e-7■□□□□ 11.1
FOXA1-201ENST00000250448 NYNRINQ9P2P1 1898 aaKnown RBP16.85■□□□□ 0.29
FOXA1-201ENST00000250448 RNF103-CHMP3A0A140T963 221 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 FXYD1O00168 92 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 CAPN3P20807 821 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 CTNNB1P35222 781 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 UNC50Q53HI1 259 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 PLPP4Q5VZY2 271 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 ADGRG5Q8IZF4 528 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 ATP6V0D2Q8N8Y2 350 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 CYGBQ8WWM9 190 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 RPRD1AQ96P16 312 aaPredicted RBP16.85■□□□□ 0.29
FOXA1-201ENST00000250448 MUC3BQ9H195 1237 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 TRPM5Q9NZQ8 1165 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 TDRKHQ9Y2W6 561 aaKnown RBP16.85■□□□□ 0.29
FOXA1-201ENST00000250448 MIA3Q5JRA6 1907 aa16.85■□□□□ 0.29
FOXA1-201ENST00000250448 NRG2O14511 850 aaPredicted RBP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 ANGPT2O15123 496 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 LILRB3O75022 631 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 ATE1O95260 518 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 SLC2A3P11169 496 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 HMOX2P30519 316 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 PCSK7Q16549 785 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 UGT3A2Q3SY77 523 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 FAM109BQ6ICB4 259 aaPredicted RBP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 DENND1CQ8IV53 801 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF683Q8IZ20 524 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 MINDY1Q8N5J2 469 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 GABPB2Q8TAK5 448 aaPredicted RBP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 CENPNQ96H22 339 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 347.8 ms