RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 OGFOD2Q6N063 350 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 FNDC11Q9BVV2 318 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 SAGE2PA6NJ88 616 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 FPGTO14772 594 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 PSMA3P25788 255 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 CAPGP40121 348 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 GLUD2P49448 558 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 C5orf22Q49AR2 442 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 INTS6LQ5JSJ4 861 aaKnown RBP19.72■□□□□ 0.75
SOX4-201ENST00000244745 TSTD2Q5T7W7 516 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 CIR1Q86X95 450 aaPredicted RBP19.72■□□□□ 0.75
SOX4-201ENST00000244745 VMP1Q96GC9 406 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 VPS51Q9UID3 782 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 MED1Q15648 1581 aaPredicted RBP19.72■□□□□ 0.75
SOX4-201ENST00000244745 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.72■□□□□ 0.75
SOX4-201ENST00000244745 UROSP10746 265 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 TPTEP56180 551 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 STYXQ8WUJ0 223 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 ZNF395Q9H8N7 513 aaPredicted RBP19.72■□□□□ 0.75
SOX4-201ENST00000244745 FABP3P05413 133 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 HOXD13P35453 343 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 MSS51Q4VC12 460 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 ZBTB2Q8N680 514 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 OR52L1Q8NGH7 329 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 APOLD1Q96LR9 279 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 PCDHAC1Q9H158 963 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 SGK2Q9HBY8 427 aa19.72■□□□□ 0.75
SOX4-201ENST00000244745 AREL1O15033 823 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 TRBC1P01850 177 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 RPL3P39023 403 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 GPR1P46091 355 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 POU5F1Q01860 360 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 LGALS3BPQ08380 585 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 LCP2Q13094 533 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 PCED1BQ96HM7 432 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 AARSD1Q9BTE6 412 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 IGSF9Q9P2J2 1179 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 RAI2Q9Y5P3 530 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 MAP2K5Q13163 448 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 GTF2H2Q13888 395 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 GTF2H2CQ6P1K8 395 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 TRIM40Q6P9F5 258 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 ZBTB8BQ8NAP8 495 aaPredicted RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 CXorf40AQ8TE69 158 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 CCDC59Q9P031 241 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 FBXW11Q9UKB1 542 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 CNTN6Q9UQ52 1028 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 MRPS7Q9Y2R9 242 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 GUCY1B2O75343 617 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 GPIP06744 558 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 AHI1Q8N157 1196 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 SIDT2Q8NBJ9 832 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 PIK3C3Q8NEB9 887 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 IRGQQ8WZA9 623 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 PPCDCQ96CD2 204 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 HNRNPABQ99729 332 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 IPPKQ9H8X2 491 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 STAT5AP42229 794 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 KCNJ11Q14654 390 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 ITFG2Q969R8 447 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 COPS8Q99627 209 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 NTPCRQ9BSD7 190 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 TOR1BO14657 336 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 SERPINA1P01009 418 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 TAF10Q12962 218 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 TARBP2Q15633 366 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 NDUFAF6Q330K2 333 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 CPTPQ5TA50 214 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 R3HCC1LQ7Z5L2 792 aaKnown RBP19.71■□□□□ 0.75
SOX4-201ENST00000244745 P2RY8Q86VZ1 359 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 TMEM192Q8IY95 271 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 SLC39A8Q9C0K1 460 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 PLK2Q9NYY3 685 aa19.71■□□□□ 0.75
SOX4-201ENST00000244745 SLC28A2O43868 658 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 PTPN5P54829 565 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 SLC9A4Q6AI14 798 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 SLC25A51Q9H1U9 297 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 NUDT4Q9NZJ9 180 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 S100A9P06702 114 aaKnown RBP19.7■□□□□ 0.74
SOX4-201ENST00000244745 ALDH4A1P30038 563 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 TCEA2Q15560 299 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 SLC10A6Q3KNW5 377 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 TMEM198Q66K66 360 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 NALCNQ8IZF0 1738 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 HSPBAP1Q96EW2 488 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 MOV10Q9HCE1 1003 aaKnown RBP19.7■□□□□ 0.74
SOX4-201ENST00000244745 OR4F21O95013 312 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 RHOQP17081 205 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 ADSLP30566 484 aaPredicted RBP19.7■□□□□ 0.74
SOX4-201ENST00000244745 CTSKP43235 329 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 HSPA7P48741 367 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 PDCD4Q53EL6 469 aaKnown RBP19.7■□□□□ 0.74
SOX4-201ENST00000244745 FAM20CQ8IXL6 584 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 LIX1Q8N485 282 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.7■□□□□ 0.74
SOX4-201ENST00000244745 SP140LQ9H930 580 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 WDR37Q9Y2I8 494 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 KLRG2A4D1S0 409 aaPredicted RBP19.7■□□□□ 0.74
SOX4-201ENST00000244745 NT5C1B-RDH14C9J2C7 533 aa19.7■□□□□ 0.74
SOX4-201ENST00000244745 STX11O75558 287 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms