RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 STX3Q13277 289 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ITGA9Q13797 1035 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 GDPD4Q6W3E5 623 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 DPY19L3Q6ZPD9 716 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 CMC1Q7Z7K0 106 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 CRLF3Q8IUI8 442 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 RYBPQ8N488 228 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-201ENST00000238688 NKAPQ8N5F7 415 aaKnown RBP13.11□□□□□ -0.31
SLIRP-201ENST00000238688 NAT16Q8N8M0 369 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 TMIEQ8NEW7 156 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 OR13C4Q8NGS5 318 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 OR6Y1Q8NGX8 325 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 RHEBL1Q8TAI7 183 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 HEXDCQ8WVB3 486 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 LPGAT1Q92604 370 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 LOXL4Q96JB6 756 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ELAC2Q9BQ52 826 aaKnown RBP13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ARRDC1-AS1Q9H2J1 176 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 GPAMQ9HCL2 828 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 ZDHHC4Q9NPG8 344 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 FBXO6Q9NRD1 293 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-201ENST00000238688 RXFP3Q9NSD7 469 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 MRGBPQ9NV56 204 aa13.11□□□□□ -0.31
SLIRP-201ENST00000238688 PLXNA2O75051 1894 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 PIKFYVEQ9Y2I7 2098 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 CCDC78A2IDD5 438 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 EIF3FO00303 357 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 VPS26AO75436 327 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 APODP05090 189 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 MC4RP32245 332 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 TIE1P35590 1138 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 GRIA2P42262 883 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 ABL2P42684 1182 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 STK19P49842 368 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 XIAPP98170 497 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 OCRLQ01968 901 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 KDSRQ06136 332 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 GALNT1Q10472 559 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 PCLAFQ15004 111 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 SETDB1Q15047 1291 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 CHI3L2Q15782 390 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 CCDC6Q16204 474 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 CDKN3Q16667 212 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 GEN1Q17RS7 908 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 ZNF805Q5CZA5 627 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 LIPMQ5VYY2 423 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 LRRC8EQ6NSJ5 796 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 CNSTQ6PJW8 725 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 PIWIL4Q7Z3Z4 852 aaKnown RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 WDR75Q8IWA0 830 aaKnown RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 CENPLQ8N0S6 344 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 RBFAQ8N0V3 343 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 TERB1Q8NA31 727 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 TXNDC5Q8NBS9 432 aaKnown RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 ATXN7L3BQ96GX2 97 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 PPP1R16AQ96I34 528 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 RPL10LQ96L21 214 aaKnown RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 TRMOQ9BU70 441 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 SMOXQ9NWM0 555 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 OXSMQ9NWU1 459 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 KCNK4Q9NYG8 393 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 PKD2L2Q9NZM6 624 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 TMEM216Q9P0N5 145 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 IL36AQ9UHA7 158 aa13.1□□□□□ -0.31
SLIRP-201ENST00000238688 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 OAS3Q9Y6K5 1087 aaKnown RBP13.1□□□□□ -0.31
SLIRP-201ENST00000238688 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 UPK3BL1B0FP48 263 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 UPK3BL2E5RIL1 263 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SLCO1B7G3V0H7 640 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 QSOX1O00391 747 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 PRMT5O14744 637 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SLC30A4O14863 429 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SRP72O76094 671 aaKnown RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 PIGNO95427 931 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 KLF8O95600 359 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 PIRTP0C851 137 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 RALBP11234 206 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 PKMP14618 531 aaKnown RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 ZNF37AP17032 561 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 BGNP21810 368 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 BCKDHBP21953 392 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 ATP5F1P24539 256 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SLC8A1P32418 973 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 HNF1BP35680 557 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 CTSOP43234 321 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 TNFRSF4P43489 277 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 NFKB2Q00653 900 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 ELP6Q0PNE2 266 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 BST1Q10588 318 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms