RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 H3BNX3 289 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 CHRM5P08912 532 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 CCNYL3P0C7X3 344 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CSH1P0DML2 217 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CSH2P0DML3 217 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 DRD4P21917 467 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SERPINA4P29622 427 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CAP2P40123 477 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 ARCN1P48444 511 aaKnown RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 ZNF549Q6P9A3 640 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 AUTS2Q8WXX7 1259 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CLPTM1LQ96KA5 538 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 ASB8Q9H765 288 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 S100A14Q9HCY8 104 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 TMEM216Q9P0N5 145 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 ZNF69Q9UC07 566 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 GTF3C4Q9UKN8 822 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 IFT52Q9Y366 437 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SQORQ9Y6N5 450 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 TPP1O14773 563 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A9O60656 530 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 IPO13O94829 963 aaKnown RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 CYP1A2P05177 515 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A6P19224 532 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A1P22309 533 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A4P22310 534 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A3P35503 534 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A5P35504 534 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SREBF1P36956 1147 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SEMG2Q02383 582 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 TCEAL6Q6IPX3 200 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 LINGO2Q7L985 606 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A7Q9HAW7 530 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A10Q9HAW8 530 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 UGT1A8Q9HAW9 530 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 MARCH2Q9P0N8 246 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SLC9A3R1O14745 358 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 SLC28A2O43868 658 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 STBD1O95210 358 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SLC35G4P0C7Q5 338 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 FUT4P22083 530 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 AHCYP23526 432 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 FLT3LGP49771 235 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 NDST1P52848 882 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 ARFIP1P53367 373 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 NOGQ13253 232 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SIM2Q14190 667 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 MAPKAPK3Q16644 382 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 INTS11Q5TA45 600 aaKnown RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 FAM151BQ6UXP7 276 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 USP49Q70CQ1 688 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 ZNF227Q86WZ6 799 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 IL22RA1Q8N6P7 574 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 HERVK_113Q902F9 699 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 NPAS2Q99743 824 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 PCYT1BQ9Y5K3 369 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 A0A0A6YYK5 440 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 ITGA2BP08514 1039 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CD86P42081 329 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 TSPAN5P62079 268 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 NAE1Q13564 534 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CBX2Q14781 532 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 ZCCHC12Q6PEW1 402 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 DGLUCYQ7Z3D6 616 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 PEX16Q9Y5Y5 336 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 KIAA0556O60303 1618 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 LAMC1P11047 1609 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 MEN1O00255 615 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CSN2P05814 226 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 LINGO3P0C6S8 592 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CRABP2P29373 138 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 MTHFRP42898 656 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SLC13A2Q13183 592 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 GRK1Q15835 563 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 BEND4Q6ZU67 534 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SIRT2Q8IXJ6 389 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 METTL27Q8N6F8 245 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 ZNF548Q8NEK5 533 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 P2RX7Q99572 595 aaKnown RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 LEF1Q9UJU2 399 aaPredicted RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 ENPP3O14638 875 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ICAM1P05362 532 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CYP3A4P08684 503 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ARP10275 920 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 ABCG1P45844 678 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 CUL2Q13617 745 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 DPYSQ14117 519 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SQLEQ14534 574 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 SLC30A10Q6XR72 485 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 C7orf57Q8NEG2 295 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 NSUN4Q96CB9 384 aaKnown RBP11.03□□□□□ -0.64
MSH6-201ENST00000234420 CPNE1Q99829 537 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 PRDM16Q9HAZ2 1276 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 TBC1D14Q9P2M4 693 aa11.03□□□□□ -0.64
MSH6-201ENST00000234420 UPB1Q9UBR1 384 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms