RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CYP11A1P05108 521 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 SLC2A2P11168 524 aaPredicted RBP8.17□□□□□ -1.1
APOB-201ENST00000233242 PSKH1P11801 424 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 RGS1Q08116 209 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 TPRG1LQ5T0D9 272 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 C8orf48Q96LL4 319 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 PTCH2Q9Y6C5 1203 aa8.17□□□□□ -1.1
APOB-201ENST00000233242 WDR4P57081 412 aaKnown RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 IQCCQ4KMZ1 466 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 BRMS1LQ5PSV4 323 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 GALNT5Q7Z7M9 940 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 TMEM192Q8IY95 271 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 LGI2Q8N0V4 545 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 DNAJA4Q8WW22 397 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 PWWP2AQ96N64 755 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 GATA5Q9BWX5 397 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 XKR8Q9H6D3 395 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 H0YAE9 185 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 TOP3BO95985 862 aaKnown RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 ZNF404Q494X3 552 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 SH3D19Q5HYK7 790 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 KCTD7Q96MP8 289 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ZDHHC18Q9NUE0 388 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ERVK-11Q9UQG0 969 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CDC40O60508 579 aaKnown RBP eCLIP8.16□□□□□ -1.12e-15■■□□□ 11.4
APOB-201ENST00000233242 ACER1Q8TDN7 264 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 RC3H2Q9HBD1 1191 aaKnown RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 CD93Q9NPY3 652 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CNOT6Q9ULM6 557 aaKnown RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 CNTN6Q9UQ52 1028 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 HLA-DQA2P01906 255 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 USP17L7P0C7H9 530 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CRTC2Q53ET0 693 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 CERS6Q6ZMG9 384 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 GALNT12Q8IXK2 581 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 GLOD4Q9HC38 313 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 NKIRAS2Q9NYR9 191 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 MYH15Q9Y2K3 1946 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 I3L521 148 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 KERAO60938 352 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 WNT3AP56704 352 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 PRKD1Q15139 912 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 IL17AQ16552 155 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CARTPTQ16568 116 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 FSTL4Q6MZW2 842 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 PLD5Q8N7P1 536 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 TIFAQ96CG3 184 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ACOX3O15254 700 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ZNF181Q2M3W8 571 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 QSOX2Q6ZRP7 698 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 LINGO1Q96FE5 620 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 SEMA3GQ9NS98 782 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 MTMR10Q9NXD2 777 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 PMM2O15305 246 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ABCB7O75027 752 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 LGR5O75473 907 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 FGBP02675 491 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 SHMT1P34896 483 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 XKR6Q5GH73 641 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 FDXACB1Q9BRP7 624 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 NECTIN3Q9NQS3 549 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 UXTQ9UBK9 157 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 PCDHGB1Q9Y5G3 927 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 KANTRA0A1W2PQU2 76 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 IL1R1P14778 569 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CDH5P33151 784 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 PNLIPRP1P54315 467 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CTBP1Q13363 440 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ATP13A4Q4VNC1 1196 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 AGMOQ6ZNB7 445 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 TNFRSF25Q93038 417 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ST6GALNAC4Q9H4F1 302 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 RAB23Q9ULC3 237 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 EME2A4GXA9 379 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 FAM149AA5PLN7 773 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CXCR6O00574 342 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 PDPK1O15530 556 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
APOB-201ENST00000233242 STRADAQ7RTN6 431 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 WDR48Q8TAF3 677 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 SPATA31A6Q5VVP1 1343 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 DEPDC5O75140 1603 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ZNF772Q68DY9 489 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 HSPBAP1Q96EW2 488 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 FCRL4Q96PJ5 515 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 C1QTNF7Q9BXJ2 289 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 TMEM39BQ9GZU3 492 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CST11Q9H112 138 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 GBA3Q9H227 469 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ADAMTS10Q9H324 1103 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 CENPBD1B2RD01 187 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 PRODHO43272 600 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ITM2AO43736 263 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 S100A2P29034 98 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 DCST1Q5T197 706 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 ERMP1Q7Z2K6 904 aa8.16□□□□□ -1.1
APOB-201ENST00000233242 C12orf43Q96C57 262 aaKnown RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 MKS1Q9NXB0 559 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms