RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 DPY19L1Q2PZI1 675 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 TIGD7Q6NT04 549 aaPredicted RBP12.31□□□□□ -0.44
NUP88-201ENST00000225696 DPP9Q86TI2 863 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 COLGALT2Q8IYK4 626 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 ARRDC2Q8TBH0 407 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 TMBIM1Q969X1 311 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 PPM1MQ96MI6 270 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 CDK15Q96Q40 435 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 SMIM14Q96QK8 99 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 ADNPQ9H2P0 1102 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 SMURF2Q9HAU4 748 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 RIC8BQ9NVN3 520 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 AIG1Q9NVV5 245 aa12.31□□□□□ -0.44
NUP88-201ENST00000225696 CCDC154A6NI56 674 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 MUSKO15146 869 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 NOBOXO60393 691 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 ECI2O75521 394 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 EEDO75530 441 aaKnown RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 SLC22A3O75751 556 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 CAPN15O75808 1086 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 PAPSS2O95340 614 aaPredicted RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 ALBP02768 609 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 ALPLP05186 524 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 FCGR1AP12314 374 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 PIGAP37287 484 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 SLC26A3P40879 764 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 LCP2Q13094 533 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 LAPTM5Q13571 262 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 NKG7Q16617 165 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 SDHAF4Q5VUM1 108 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 LAIR2Q6ISS4 152 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 CIR1Q86X95 450 aaPredicted RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 TMEM86AQ8N2M4 240 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 TMEM199Q8N511 208 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 PROKR1Q8TCW9 393 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 ISG20Q96AZ6 181 aaKnown RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 SP110Q9HB58 689 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 EXD2Q9NVH0 621 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 PAIP2BQ9ULR5 123 aaKnown RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 PCDHGA8Q9Y5G5 932 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 ACTL7AQ9Y615 435 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 DICER1Q9UPY3 1922 aaKnown RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 ARL5CA6NH57 179 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 MAN1A2O60476 641 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 BCL10O95999 233 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 ITGB1P05556 798 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 THP07101 528 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 AGXTP21549 392 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 CRHBPP24387 322 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 OPRL1P41146 370 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 POLR2JP52435 117 aaKnown RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 TMBIM6P55061 237 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 BEX3Q00994 111 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 KCNC4Q03721 635 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 MFSD10Q14728 455 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 PCBP1Q15365 356 aaKnown RBP eCLIP12.3□□□□□ -0.44
NUP88-201ENST00000225696 MEP1AQ16819 746 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 CTU2Q2VPK5 515 aaKnown RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 MARC1Q5VT66 337 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 GLYATQ6IB77 296 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 GRAMD4Q6IC98 578 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 FAM171BQ6P995 826 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 NCCRP1Q6ZVX7 275 aaPredicted RBP12.3□□□□□ -0.44
NUP88-201ENST00000225696 STK32CQ86UX6 486 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 SPARTQ8N0X7 666 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 NPLOC4Q8TAT6 608 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 FKBP10Q96AY3 582 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 DGCR6LQ9BY27 220 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 TOR3AQ9H497 397 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 ERGIC3Q9Y282 383 aa12.3□□□□□ -0.44
NUP88-201ENST00000225696 CRCPO75575 148 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 CLPXO76031 633 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 GLP2RO95838 553 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 OR4Q2P0C623 313 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 FSHRP23945 695 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 CYP2C18P33260 490 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 CDKN1CP49918 316 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 DGKQP52824 942 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 MLLT6P55198 1093 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 FOXM1Q08050 763 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 CBX2Q14781 532 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 PDCD4Q53EL6 469 aaKnown RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 COQ5Q5HYK3 327 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 BRMS1LQ5PSV4 323 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 DLEU7Q6UYE1 221 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 SLC16A12Q6ZSM3 486 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 GALNT7Q86SF2 657 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 RBM23Q86U06 439 aaKnown RBP12.29□□□□□ -0.44
NUP88-201ENST00000225696 SFRP1Q8N474 314 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 FBXO39Q8N4B4 442 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 PKMYT1Q99640 499 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 TUBA1CQ9BQE3 449 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 TINF2Q9BSI4 451 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 AMBRA1Q9C0C7 1298 aa12.29□□□□□ -0.44
NUP88-201ENST00000225696 ING2Q9H160 280 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms