RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ERMP1Q7Z2K6 904 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 ITIH5Q86UX2 942 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 PHYKPLQ8IUZ5 450 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 TWIST2Q8WVJ9 160 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 MID1IP1Q9NPA3 183 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 PNPLA3Q9NST1 481 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 NLE1Q9NVX2 485 aaPredicted RBP24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZNF840PA6NDX5 716 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 STX16O14662 325 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 TLR5O60602 858 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 TBX18O95935 607 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 C8AP07357 584 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 MTHFD2P13995 350 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 CLCN4P51793 760 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 LCP2Q13094 533 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 KIF19Q2TAC6 998 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 INTS11Q5TA45 600 aaKnown RBP24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 RAP1GAP2Q684P5 730 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 LCN8Q6JVE9 175 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 TXNDC11Q6PKC3 985 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 OR52K2Q8NGK3 314 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 HM13Q8TCT9 377 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 SLC45A3Q96JT2 553 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 PRPF18Q99633 342 aaKnown RBP24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 MAGEH1Q9H213 219 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 NKX2-4Q9H2Z4 354 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 CCSER2Q9H7U1 834 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 PDFQ9HBH1 243 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 TRPM5Q9NZQ8 1165 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 MSRAQ9UJ68 235 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 CNOT6Q9ULM6 557 aaKnown RBP24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 CRYL1Q9Y2S2 319 aa24.73■■□□□ 1.55
RUNDC3A-201ENST00000225441 ANGPT2O15123 496 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 RAB30Q15771 203 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 PDE12Q6L8Q7 609 aaKnown RBP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 AFTPHQ6ULP2 937 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 PIM3Q86V86 326 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 MFSD2AQ8NA29 543 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 DNAJC1Q96KC8 554 aaKnown RBP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 C3orf30Q96M34 536 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 RPRD1AQ96P16 312 aaPredicted RBP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 CDK5RAP1Q96SZ6 601 aaKnown RBP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 ANKRD60Q9BZ19 345 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 TAS2R13Q9NYV9 303 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 APPL1Q9UKG1 709 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 SNX13Q9Y5W8 968 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 LAMA2P24043 3122 aaKnown RBP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 C7orf72A4D263 438 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 PFDN6O15212 129 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 H6PDO95479 791 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 LRG1P02750 347 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 IL10P22301 178 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 OR1E1P30953 314 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 RALGDSQ12967 914 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 LDB1Q86U70 411 aaPredicted RBP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 NKAPQ8N5F7 415 aaKnown RBP24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 TRIB3Q96RU7 358 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 TRIM54Q9BYV2 358 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 KCTD3Q9Y597 815 aa24.72■■□□□ 1.55
RUNDC3A-201ENST00000225441 ANKRD36A6QL64 1941 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 CEP290O15078 2479 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 FCGR1AP12314 374 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZNF23P17027 643 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 PPP3CCP48454 512 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 ATXN3P54252 364 aaPredicted RBP24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 RAD51Q06609 339 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 OR4D1Q15615 310 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 ANKS6Q68DC2 871 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 IYDQ6PHW0 289 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 RPS27LQ71UM5 84 aaKnown RBP24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 METTL25Q8N6Q8 603 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 BLOC1S5Q8TDH9 187 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 MGME1Q9BQP7 344 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 CERS4Q9HA82 394 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 TUBA8Q9NY65 449 aaPredicted RBP24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 ACTR3BQ9P1U1 418 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 MAP10Q9P2G4 905 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 SEPT3Q9UH03 358 aa24.71■■□□□ 1.55
RUNDC3A-201ENST00000225441 KANSL1LA0AUZ9 987 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 OR51F1A6NGY5 319 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 PIP5K1BO14986 540 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 KLK8O60259 260 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 C1RP00736 705 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 SLC4A1P02730 911 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 KLHDC10Q6PID8 442 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZBTB49Q6ZSB9 765 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 MIB1Q86YT6 1006 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 CAMK1DQ8IU85 385 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 TSPAN14Q8NG11 270 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 CDKN2AIPNLQ96HQ2 116 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 CCDC68Q9H2F9 335 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZNF334Q9HCZ1 680 aaPredicted RBP24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 PTBP2Q9UKA9 531 aaKnown RBP24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 MYRFQ9Y2G1 1151 aa24.7■■□□□ 1.55
RUNDC3A-201ENST00000225441 SLC12A8A0AV02 714 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 GRXCR2A6NFK2 248 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 OR6B1O95007 311 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 NPPAP01160 153 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 PYGLP06737 847 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms