RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ZDHHC18Q9NUE0 388 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GPATCH2LQ9NWQ4 482 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CMTM6Q9NX76 183 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KLK14Q9P0G3 267 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 MRPS33Q9Y291 106 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGB6Q9Y5F9 930 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CAMTA1Q9Y6Y1 1673 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NINQ8N4C6 2090 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 DPPA5A6NC42 116 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PRORSD1PA6NEY8 169 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 DDTLA6NHG4 134 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 KCNK1O00180 336 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FPGTO14772 594 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 AKAP8O43823 692 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 TSC22D2O75157 780 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NDST3O95803 873 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ATF6P18850 670 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 IDH3AP50213 366 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CCNHP51946 323 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 TMBIM6P55061 237 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TXNL4AP83876 142 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 MBTD1Q05BQ5 628 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 XKR6Q5GH73 641 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 OLFML1Q6UWY5 402 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TRMT11Q7Z4G4 463 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 OXR1Q8N573 874 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SLC22A17Q8WUG5 538 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CCDC107Q8WV48 283 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CPT1BQ92523 772 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FKBP10Q96AY3 582 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CREB3L1Q96BA8 519 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PPCDCQ96CD2 204 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 C8orf48Q96LL4 319 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 MNTQ99583 582 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TRIM2Q9C040 744 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 STOX2Q9P2F5 926 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 MTRRQ9UBK8 725 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGA10Q9Y5H3 936 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ANKRD63C9JTQ0 380 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 UBE2Q2LH0YL09 131 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 AP3D1O14617 1153 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 PLIN3O60664 434 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ANGPTL1O95841 491 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 PENKP01210 267 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 PIGRP01833 764 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 PGRP06401 933 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 AP1S1P61966 158 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 RPL38P63173 70 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 DGCR6Q14129 220 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 BOP1Q14137 746 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 LARS2Q15031 903 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 QPCTQ16769 361 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ATP13A5Q4VNC0 1218 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 SPIN4Q56A73 249 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ZNF697Q5TEC3 545 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 LLGL2Q6P1M3 1020 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ABHD15Q6UXT9 468 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 GSTCDQ8NEC7 633 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 FBXO30Q8TB52 745 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 DNAJB14Q8TBM8 379 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ZUFSPQ96AP4 578 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 LINGO1Q96FE5 620 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 P2RY11Q96G91 374 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 FEM1CQ96JP0 617 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MARK4Q96L34 752 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 TRIB3Q96RU7 358 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 SLC29A3Q9BZD2 475 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ASB8Q9H765 288 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 OXSMQ9NWU1 459 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CNTN3Q9P232 1028 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 COG5Q9UP83 839 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 RIIAD1A6NNX1 92 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 AGPSO00116 658 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MATN3O15232 486 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CCNKO75909 580 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 PAPSS2O95340 614 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 ADH1CP00326 375 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 TRBC1P01850 177 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ITIH1P19827 911 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CDC25CP30307 473 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MARCKSL1P49006 195 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 RPL7AP62424 266 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 FOXD4Q12950 439 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 C11orf91Q3C1V1 193 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 KCNK18Q7Z418 384 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 PDSS2Q86YH6 399 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ELMO1Q92556 727 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 SCGB3A2Q96PL1 93 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ZNF317Q96PQ6 595 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 OSMRQ99650 979 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MGME1Q9BQP7 344 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MAGEH1Q9H213 219 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 KAT8Q9H7Z6 458 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 BRD9Q9H8M2 597 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CHKBQ9Y259 395 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 SLC27A6Q9Y2P4 619 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 DHRS7Q9Y394 339 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MAFBQ9Y5Q3 323 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 ATRNL1Q5VV63 1379 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 NUP205Q92621 2012 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms