RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Cyp3a44Q9EQW4 504 aa13.25□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ptk2bQ9QVP9 1009 aa13.25□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Syndig1A2ANU3 258 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cylc2B1AWN8 422 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 9230113P08RikD3YWX3 137 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Vmn2r118E9Q1C1 853 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Neurod4O09105 330 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Neu1O35657 409 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Slc22a2O70577 553 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Psmd3P14685 530 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Vps26aP40336 327 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cdkn2bP55271 130 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Psme3P61290 254 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pde7aP70453 456 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pgap2Q3TQR0 254 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 TsnQ62348 228 aaKnown RBP13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Bcl2l1Q64373 233 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Bfsp2Q6NVD9 416 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Naif1Q6PFD7 327 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Casd1Q7TN73 797 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Itln1bQ80ZA0 313 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cox14Q8BH51 57 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Snapc1Q8K0S9 389 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Irak3Q8K4B2 609 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Nudt4Q8R2U6 179 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Dlg2Q91XM9 852 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 ProzQ9CQW3 399 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ska2Q9CR46 120 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ccdc97Q9DBT3 340 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 FancgQ9EQR6 623 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Chrnb2Q9ERK7 501 aa13.24□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Zfp952B0V2W4 504 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Sec22bO08547 215 aaKnown RBP13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gp5O08742 567 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cxcr3O88410 367 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Hcn3O88705 779 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 LtfP08071 707 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cyp2a4P15392 494 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cyr61P18406 379 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cyp2a5P20852 494 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Traf2P39429 501 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Mxd1P50538 227 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Plk2P53351 682 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pex2P55098 305 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Hoxd13P70217 339 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Mtf2Q02395 593 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ntrk1Q3UFB7 799 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Hs3st2Q673U1 367 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Tnpo3Q6P2B1 923 aaKnown RBP13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Smpd4Q6ZPR5 823 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Usp8Q80U87 1080 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ugt2a1Q80X89 528 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pqlc1Q80XM9 271 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Q8CC96 669 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Mark4Q8CIP4 752 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Slc30a5Q8R4H9 761 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Tnip2Q99JG7 430 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 AasdhpptQ9CQF6 309 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Fcf1Q9CTH6 198 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Vsig1Q9D2J4 407 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Yae1d1Q9DAY6 216 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 ScelQ9EQG3 652 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Kat2bQ9JHD1 813 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Akr1a1Q9JII6 325 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 ProdhQ9WU79 599 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Asb3Q9WV72 525 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 PikfyveQ9Z1T6 2097 aa13.23□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gbp4A4UUI3 631 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gbp11A9YVJ5 442 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Fam124aD3Z5V4 536 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 GmlE9PX31 176 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Krt90E9Q1Z0 538 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Speer4f2E9Q366 295 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Kbtbd2G3X9X1 623 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gm10715J3QP74 227 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Vmn2r2L7N2E9 908 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Atn1O35126 1175 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pdlim1O70400 327 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Gstm1P10649 218 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ctla2bP12400 113 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Scg5P12961 212 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 LmnaP48678 665 aaKnown RBP13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pim3P58750 326 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Ext2P70428 718 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Pld2P97813 933 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 4930430A15RikQ05AC5 485 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Fam47cQ14BE7 430 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Col28a1Q2UY11 1141 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Entpd7Q3TCT4 606 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Akr1clQ3UXL1 322 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Tapt1Q4VBD2 564 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Cd6Q61003 665 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Six3Q62233 333 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Klhl14Q69ZK5 630 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Taf1cQ6PDZ2 836 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Tmem214Q8BM55 687 aaKnown RBP13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Chst8Q8BQ86 417 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Agbl3Q8CDP0 1006 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Q8VDP2 222 aa13.22□□□□□ -0.29
Pdlim5-208ENSMUST00000196220 Olfr1311Q8VET0 312 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms