RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Btbd35f19A2CG71 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f10A2CG92 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f3A2CGC2 496 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f13B8JKF6 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Zbtb10E9Q8X5 861 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Vmn2r65G3X931 845 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f2J3QMS5 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f25J3QMV9 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f6J3QMW9 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f26J3QNK2 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f24J3QNQ5 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f8J3QQ50 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f17L7MU81 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f18L7MU83 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Fzd1O70421 642 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 RabggtbP53612 339 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ephb3P54754 993 aaKnown RBP13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ext2P70428 718 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Htr4P97288 388 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 HdxQ14B70 692 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f14Q1LZI5 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Btbd35f27Q5FWA1 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Taar7eQ5QD09 358 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rfx4Q7TNK1 735 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Chil6Q80W26 440 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rap2cQ8BU31 183 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Anapc2Q8BZQ7 837 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tmem154Q8C4Q9 181 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Olfr1019Q8VGS3 310 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 GMCL1P1Q99N64 498 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ska2Q9CR46 120 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tbc1d21Q9D9D3 336 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Slc22a17Q9D9E0 401 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ddx59Q9DBN9 619 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Irs2P81122 1321 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Cylc2B1AWN8 422 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gm21738J3QP72 227 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gm3239L7N2D9 227 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ptch2O35595 1182 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Top3aO70157 1003 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Yme1l1O88967 715 aaKnown RBP13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ctnnb1Q02248 781 aaKnown RBP13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 LchnQ3UHG7 455 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Brsk1Q5RJI5 778 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Sdf4Q61112 361 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Pcbp2Q61990 362 aaKnown RBP13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Dlx3Q64205 287 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Casc4Q6P2L7 435 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Sarm1Q6PDS3 724 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Smpd4Q6ZPR5 823 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Olfr1037Q7TR84 321 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Nup93Q8BJ71 819 aaKnown RBP13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Vps39Q8R5L3 886 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Haus8Q99L00 373 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tchhl1Q9D3P1 638 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Cyp2c55Q9D816 490 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Stk19Q9JHN8 254 aa13.34□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Slc23a4A0A0J9YUX7 615 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Zbed5B2RPU8 756 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tmem240B2RWJ3 173 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Mtx3D3YTP3 312 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 PbsnO08976 174 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Stx7O70439 261 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Mybpc3O70468 1270 aaKnown RBP13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Slfn4Q3UV66 602 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 MelkQ61846 643 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rnf38Q8BI21 518 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tp53bp2Q8CG79 1128 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Hacd3Q8K2C9 362 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rnf31Q924T7 1066 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Pmf1Q9CPV5 202 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Spag6Q9JLI7 507 aa13.33□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gm28168A0A087WNP1 180 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Skint1A7TZE6 364 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Gm20431E9PY39 371 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Fitm2P59266 262 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Olfr834Q7TRG8 312 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Disc1Q811T9 852 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Zbtb33Q8BN78 671 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Gsg1Q8R1W2 324 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Zdhhc7Q91WU6 308 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Mki67E9PVX6 3177 aaKnown RBP13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 CercamA3KGW5 592 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Sema6aO35464 1031 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 InvsO89019 1062 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Ctps1P70698 591 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 VegfcP97953 415 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 March9Q3TZ87 348 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Tnks2Q3UES3 1166 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Ankrd34bQ3UUF8 508 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Olfr463Q5SW49 311 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Olfr462Q5SW50 311 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Tmem199Q5SYH2 208 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Bdkrb1Q61125 334 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 GpamQ61586 827 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Itih1Q61702 907 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Ccdc116Q80X53 541 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Samd4aQ8CBY1 711 aaKnown RBP13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Serpina3nQ91WP6 418 aa13.33□□□□□ -0.28
Rnf4-204ENSMUST00000182047 Fam90a1bQ9D4F3 419 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms